Factsheet for TraesCS4B01G027100.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G024900.1	Wheat	endoplasmic reticulum, plasma membrane	96.43	96.96
TraesCS4A01G285700.1	Wheat	endoplasmic reticulum, plasma membrane	93.68	96.6
HORVU4Hr1G004100.1	Barley	endoplasmic reticulum, plasma membrane	95.05	94.28
EER93662	Sorghum	endoplasmic reticulum, plasma membrane	83.24	83.7
Zm00001d033522_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	82.42	83.57
Os03t0683800-01	Rice	plastid	81.59	83.19
GSMUA_Achr4P17640_001	Banana	extracellular, plasma membrane	66.21	67.32
PGSC0003DMT400088508	Potato	extracellular	26.1	59.75
AT5G03810.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	56.87	58.64
Bra005782.1-P	Field mustard	extracellular, plasma membrane	56.87	58.64
VIT_08s0007g04300.t01	Wine grape	extracellular, vacuole	58.24	58.4
Bra005781.1-P	Field mustard	plastid	33.52	58.37
CDX80889	Canola	extracellular, plasma membrane	56.32	58.07
PGSC0003DMT400001233	Potato	extracellular, plasma membrane	56.32	58.07
PGSC0003DMT400021670	Potato	extracellular	55.49	58.05
KRH26558	Soybean	endoplasmic reticulum, extracellular, vacuole	55.49	57.71
Bra028818.1-P	Field mustard	extracellular, plasma membrane	55.49	57.71
Solyc10g085740.1.1	Tomato	extracellular	54.95	57.47
Solyc11g066700.1.1	Tomato	extracellular, plasma membrane	56.04	57.46
CDY04898	Canola	extracellular, plasma membrane	54.95	57.14
CDX95394	Canola	extracellular	54.67	56.7
GSMUA_Achr2P12520_001	Banana	plastid	60.99	56.06
CDY14175	Canola	extracellular, plasma membrane	50.0	55.66
Bra040686.1-P	Field mustard	extracellular, plasma membrane	53.57	55.56
CDX76226	Canola	extracellular, plasma membrane	53.57	55.56
AT3G53100.1	Thale cress	extracellular	53.3	55.27
CDY09169	Canola	endoplasmic reticulum, extracellular, plasma membrane	54.4	54.85
Bra020216.1-P	Field mustard	extracellular	54.12	54.72
CDY50286	Canola	extracellular	54.12	54.72
KRH30531	Soybean	extracellular, vacuole	53.02	54.67
AT5G22810.1	Thale cress	extracellular	53.85	54.6
CDY11271	Canola	extracellular, plasma membrane	54.4	53.95
AT5G03820.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	56.32	53.25
KRH25150	Soybean	extracellular	42.58	50.65
KRH22747	Soybean	mitochondrion	57.42	49.18
Solyc09g008690.1.1	Tomato	extracellular	31.32	48.72
PGSC0003DMT400033798	Potato	extracellular	31.04	48.29

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0016298	GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514
InterPro:Lipase_GDSL_AS	PFAM:PF00657	ScanProsite:PS01098	PANTHER:PTHR22835	PANTHER:PTHR22835:SF146	InterPro:SGNH_hydro_sf
InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G027100	EnsemblPlants:TraesCS4B01G027100.1
TIGR:cd01837	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:20583331..20588310

Molecular Weight (calculated)

38346.6 Da

IEP (calculated)

6.498

GRAVY (calculated)

0.145

Length

364 amino acids

Sequence
(BLAST)

001: MQRQIFHMAT AVAWAPLLLV LLSASLSSRC AGQALVPGVM IFGDSVVDAG NNNRLATLVR ADFPPYGRDF PATHAPTGRF CNGKLATDYT VESLGLSSYP
101: PAYLSDEAQS DNRTLLHGAN FASGAAGYLD ATAALYGAIS LGRQLDYFKE YQSKVAAVAG EKRAAALTSG SIYVVSAGTS DYVQNYYVNA MLAAAYTPDQ
201: FADALMQPFT AFVERLYGLG ARRIGVTSLP PMGCLPASVT LFGGGGGGGC VERLNNDSLT FNAKLQAASD AAKKRHSDLK LVVFDIYNPL LNLVADPMSA
301: GFFESRRACC GTGTIETSVL CHQGAPGTCA NATGYVFWDG FHPTDAANKV LADALLLQGL QLIS

Best Arabidopsis Sequence Match ( AT5G03810.1 )
(BLAST)

001: MKMFITMSMC LSVIACFYAG VGTGETLVPA LIIMGDSVVD AGNNNHRITL VKANFPPYGR DFVAHSATGR FSNGKLATDF TAENLGFTSY PVAYLSQEAN
101: ETNLLTGANF ASGASGFDDA TAIFYNAITL SQQLKNYKEY QNKVTNIVGK ERANEIFSGA IHLLSTGSSD FLQSYYINPI LNRIFTPDQY SDHLLRSYST
201: FVQNLYGLGA RRIGVTTLPP LGCLPAAITL FGGVGNNMCV ERLNQDAVSF NTKLNNTSIN LTNNLPGLKL VVFDIYNPLL NMVINPVEYG FFESRRACCG
301: TGTMETSFLC NALSVGTCSN ATNYVFWDGF HPSEAANRVI ANNLLVQGIP LIS

Arabidopsis Description

GDSL esterase/lipase At5g03810 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFN0]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.