Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G03810.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 82.6 | 90.08 |
| CDY04898 | Canola | extracellular, plasma membrane | 77.92 | 85.71 |
| Bra028818.1-P | Field mustard | extracellular, plasma membrane | 77.66 | 85.43 |
| Bra005781.1-P | Field mustard | plastid | 44.94 | 82.78 |
| CDY14175 | Canola | extracellular, plasma membrane | 70.13 | 82.57 |
| Bra005782.1-P | Field mustard | extracellular, plasma membrane | 74.55 | 81.3 |
| CDX80889 | Canola | extracellular, plasma membrane | 74.29 | 81.02 |
| CDY11271 | Canola | extracellular, plasma membrane | 71.17 | 74.66 |
| GSMUA_Achr4P17640_001 | Banana | extracellular, plasma membrane | 58.44 | 62.85 |
| AT5G22810.1 | Thale cress | extracellular | 56.36 | 60.45 |
| TraesCS4A01G285700.1 | Wheat | endoplasmic reticulum, plasma membrane | 53.51 | 58.36 |
| AT3G53100.1 | Thale cress | extracellular | 52.99 | 58.12 |
| Os03t0683800-01 | Rice | plastid | 53.51 | 57.7 |
| TraesCS4D01G024900.1 | Wheat | endoplasmic reticulum, plasma membrane | 53.51 | 56.91 |
| Zm00001d033522_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 52.73 | 56.55 |
| TraesCS4B01G027100.1 | Wheat | endoplasmic reticulum, plasma membrane | 53.25 | 56.32 |
| HORVU4Hr1G004100.1 | Barley | endoplasmic reticulum, plasma membrane | 53.51 | 56.13 |
| AT3G16370.1 | Thale cress | endoplasmic reticulum, vacuole | 51.43 | 56.09 |
| EER93662 | Sorghum | endoplasmic reticulum, plasma membrane | 52.73 | 56.08 |
| GSMUA_Achr2P12520_001 | Banana | plastid | 54.55 | 53.03 |
| AT5G63170.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 34.81 | 39.65 |
| AT1G23500.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 34.55 | 38.55 |
| AT2G31550.1 | Thale cress | cytosol | 21.04 | 36.99 |
| AT1G73610.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 31.69 | 35.47 |
| AT1G75910.1 | Thale cress | endoplasmic reticulum, plasma membrane | 30.39 | 34.11 |
| AT1G20135.1 | Thale cress | extracellular, plasma membrane | 28.57 | 33.54 |
| AT1G75930.1 | Thale cress | extracellular, plasma membrane | 28.83 | 32.36 |
| AT1G75920.1 | Thale cress | plasma membrane | 29.61 | 32.29 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | EntrezGene:831713 | UniProt:A0A1P8BG41 | ProteinID:ANM70554.1 | ArrayExpress:AT5G03820 |
| EnsemblPlantsGene:AT5G03820 | RefSeq:AT5G03820 | TAIR:AT5G03820 | RefSeq:AT5G03820-TAIR-G | EnsemblPlants:AT5G03820.2 | InterPro:GDSL |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016042 | GO:GO:0016298 |
| GO:GO:0016787 | GO:GO:0016788 | InterPro:IPR036514 | InterPro:Lipase_GDSL_AS | RefSeq:NP_196002.2 | PFAM:PF00657 |
| ScanProsite:PS01098 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF146 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 |
| TMHMM:TMhelix | UniParc:UPI000848C5AF | SEG:seg | : | : | : |
Description
GDSL-like Lipase/Acylhydrolase family protein [Source:TAIR;Acc:AT5G03820]
Coordinates
chr5:-:1015586..1017514
Molecular Weight (calculated)
42388.9 Da
IEP (calculated)
8.023
GRAVY (calculated)
0.039
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVISLIYLP LKPYLFTHSY LYLLLHYFKQ KMKMFIIMLM TFSVIACFYA GVGTGEPLVP ALIIMGDSVV DAGNNNRLNT LIKANFPPYG RDFLAHNATG
101: RFSNGKLATD FTAESLGFTS YPVPYLSQEA NGTNLLTGAN FASGASGYDD GTAIFYNAIT LNQQLKNYKE YQNKVTNIVG SERANKIFSG AIHLLSTGSS
201: DFLQSYYINP ILNRIFTPDQ YSDRLMKPYS TFVQNLYDLG ARKIGVTTLP PLGCLPAAIT LFGETGNNNT CVERLNQDAV SFNTKLNNTS MNLTNNLPGL
301: KLVVFDIYNP LLNMAMNPVE NGFFESRRAC CGTGTVETSF LCNARSVGTC SNATNYVFWD GFHPSEAANR VIANNLLVQG IPLIS
101: RFSNGKLATD FTAESLGFTS YPVPYLSQEA NGTNLLTGAN FASGASGYDD GTAIFYNAIT LNQQLKNYKE YQNKVTNIVG SERANKIFSG AIHLLSTGSS
201: DFLQSYYINP ILNRIFTPDQ YSDRLMKPYS TFVQNLYDLG ARKIGVTTLP PLGCLPAAIT LFGETGNNNT CVERLNQDAV SFNTKLNNTS MNLTNNLPGL
301: KLVVFDIYNP LLNMAMNPVE NGFFESRRAC CGTGTVETSF LCNARSVGTC SNATNYVFWD GFHPSEAANR VIANNLLVQG IPLIS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.