Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 6
- plastid 1
- vacuole 4
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024605.1-P | Field mustard | extracellular | 76.23 | 78.04 |
| CDY25788 | Canola | extracellular | 72.75 | 73.61 |
| Bra012377.1-P | Field mustard | extracellular | 72.75 | 73.61 |
| CDY44153 | Canola | cytosol | 73.91 | 72.44 |
| CDY04705 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 73.62 | 71.55 |
| AT1G73610.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 68.41 | 68.6 |
| CDY54289 | Canola | extracellular | 68.12 | 68.31 |
| AT5G63170.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 57.68 | 58.88 |
| AT1G20135.1 | Thale cress | extracellular, plasma membrane | 52.75 | 55.49 |
| AT1G75910.1 | Thale cress | endoplasmic reticulum, plasma membrane | 47.54 | 47.81 |
| AT1G75930.1 | Thale cress | extracellular, plasma membrane | 47.25 | 47.52 |
| AT1G75920.1 | Thale cress | plasma membrane | 47.25 | 46.18 |
| KRH05981 | Soybean | extracellular | 46.96 | 44.26 |
| KRH17464 | Soybean | extracellular | 46.67 | 43.87 |
| AT5G03810.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 37.68 | 36.83 |
| AT3G16370.1 | Thale cress | endoplasmic reticulum, vacuole | 37.39 | 36.54 |
| AT5G03820.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 38.55 | 34.55 |
| VIT_09s0002g03050.t01 | Wine grape | extracellular | 10.43 | 34.29 |
| TraesCS7D01G346800.1 | Wheat | cytosol, extracellular, mitochondrion | 13.04 | 32.14 |
| AT2G31550.1 | Thale cress | cytosol | 20.29 | 31.96 |
| AT5G22810.1 | Thale cress | extracellular | 32.46 | 31.2 |
| AT3G53100.1 | Thale cress | extracellular | 30.43 | 29.91 |
| Zm00001d024117_P001 | Maize | cytosol, mitochondrion | 10.14 | 25.55 |
| Zm00001d044521_P001 | Maize | cytosol, mitochondrion | 10.14 | 25.55 |
| HORVU1Hr1G065930.2 | Barley | mitochondrion | 19.42 | 16.83 |
| Os06t0148600-01 | Rice | cytosol, golgi, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | EntrezGene:838958 | ProteinID:AAC98006.1 | ProteinID:AAF79588.1 | ProteinID:AEE30395.1 |
| ArrayExpress:AT1G23500 | EnsemblPlantsGene:AT1G23500 | RefSeq:AT1G23500 | TAIR:AT1G23500 | RefSeq:AT1G23500-TAIR-G | EnsemblPlants:AT1G23500.1 |
| TAIR:AT1G23500.1 | Unigene:At.51736 | InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 |
| GO:GO:0016298 | GO:GO:0016787 | GO:GO:0016788 | InterPro:IPR036514 | InterPro:Lipase_GDSL_AS | RefSeq:NP_173764.1 |
| PFAM:PF00657 | ScanProsite:PS01098 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF330 | UniProt:Q9ZUE4 | InterPro:SGNH_hydro_sf |
| InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | SignalP:SignalP-noTM | UniParc:UPI00000A6FB2 | SEG:seg | : |
Description
GDSL esterase/lipase At1g23500 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUE4]
Coordinates
chr1:+:8339668..8341072
Molecular Weight (calculated)
37474.5 Da
IEP (calculated)
8.885
GRAVY (calculated)
0.131
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFSLLSTML MALSSVCLFF VGYAQQFSGS VAVSALFAFG DSILDTGNNN NLNTLSKCNF FPYGRNFIGG KATGRFGNGR VFSDMIAEGL NVKKLLPAYR
101: DPNLSKNDLP TGVCFASGGS GLDERTARSQ GVIWVPDQVK DFKEYIMKLN GVVRDKRKVN AIISNAVYLI SAGNNDLAIT YPTLMAQYTV STYTDLLVTW
201: TDNLLKSLYA MGARKFAVLG TLPLGCLPGA RHTGGNFGNI CLVPINQVAA IFNQKLSAKL NNLHTILPGA KFVYVDMYNP LLNLINNPRA SGFIDVADGC
301: CCMPTSPVPC PDASQYVFWD FAHPSEKSYM TIAPKIIEGI KKNLA
101: DPNLSKNDLP TGVCFASGGS GLDERTARSQ GVIWVPDQVK DFKEYIMKLN GVVRDKRKVN AIISNAVYLI SAGNNDLAIT YPTLMAQYTV STYTDLLVTW
201: TDNLLKSLYA MGARKFAVLG TLPLGCLPGA RHTGGNFGNI CLVPINQVAA IFNQKLSAKL NNLHTILPGA KFVYVDMYNP LLNLINNPRA SGFIDVADGC
301: CCMPTSPVPC PDASQYVFWD FAHPSEKSYM TIAPKIIEGI KKNLA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.