Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50286 | Canola | extracellular | 91.92 | 91.67 |
| Bra020216.1-P | Field mustard | extracellular | 91.64 | 91.39 |
| CDY09169 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 91.64 | 91.14 |
| KRH26558 | Soybean | endoplasmic reticulum, extracellular, vacuole | 67.97 | 69.71 |
| KRH30531 | Soybean | extracellular, vacuole | 66.85 | 67.99 |
| PGSC0003DMT400001233 | Potato | extracellular, plasma membrane | 66.3 | 67.42 |
| Solyc11g066700.1.1 | Tomato | extracellular, plasma membrane | 66.02 | 66.76 |
| KRH25150 | Soybean | extracellular | 54.04 | 63.4 |
| AT5G03810.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 60.17 | 61.19 |
| GSMUA_Achr4P17640_001 | Banana | extracellular, plasma membrane | 59.89 | 60.06 |
| KRH22747 | Soybean | mitochondrion | 68.25 | 57.65 |
| AT3G53100.1 | Thale cress | extracellular | 56.27 | 57.55 |
| AT3G16370.1 | Thale cress | endoplasmic reticulum, vacuole | 55.99 | 56.94 |
| AT5G03820.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 60.45 | 56.36 |
| TraesCS4A01G285700.1 | Wheat | endoplasmic reticulum, plasma membrane | 55.15 | 56.09 |
| Os03t0683800-01 | Rice | plastid | 55.71 | 56.02 |
| Zm00001d033522_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 54.87 | 54.87 |
| EER93662 | Sorghum | endoplasmic reticulum, plasma membrane | 55.15 | 54.7 |
| TraesCS4D01G024900.1 | Wheat | endoplasmic reticulum, plasma membrane | 54.87 | 54.42 |
| TraesCS4B01G027100.1 | Wheat | endoplasmic reticulum, plasma membrane | 54.6 | 53.85 |
| HORVU4Hr1G004100.1 | Barley | endoplasmic reticulum, plasma membrane | 54.6 | 53.41 |
| GSMUA_Achr2P12520_001 | Banana | plastid | 56.55 | 51.26 |
| AT5G63170.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 33.15 | 35.21 |
| AT2G31550.1 | Thale cress | cytosol | 21.17 | 34.7 |
| AT1G23500.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 31.2 | 32.46 |
| AT1G73610.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 30.64 | 31.98 |
| AT1G20135.1 | Thale cress | extracellular, plasma membrane | 28.69 | 31.4 |
| AT1G75910.1 | Thale cress | endoplasmic reticulum, plasma membrane | 28.97 | 30.32 |
| AT1G75930.1 | Thale cress | extracellular, plasma membrane | 28.41 | 29.74 |
| AT1G75920.1 | Thale cress | plasma membrane | 28.97 | 29.46 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | ArrayExpress:AT5G22810 | EnsemblPlantsGene:AT5G22810 | RefSeq:AT5G22810 | TAIR:AT5G22810 |
| RefSeq:AT5G22810-TAIR-G | EnsemblPlants:AT5G22810.1 | TAIR:AT5G22810.1 | Unigene:At.31041 | InterPro:GDSL | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016787 | GO:GO:0016788 | InterPro:IPR036514 | PFAM:PF00657 |
| PANTHER:PTHR22835 | PANTHER:PTHR22835:SF288 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0003E626C8 | SEG:seg | : | : | : |
Description
GDSL-like Lipase/Acylhydrolase superfamily protein [Source:TAIR;Acc:AT5G22810]
Coordinates
chr5:+:7621502..7623367
Molecular Weight (calculated)
39212.7 Da
IEP (calculated)
6.123
GRAVY (calculated)
0.033
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFSGIWLNL YVVFGSLMVF ERMVVMKAQP LVPAIFIFGD SVVDVGNNND IYTIVKANFP PYGRDFTTHT PTGRFCNGKL ATDFTAENLG FKSYPQAYLS
101: KKAKGKNLLI GANFASAASG YYDGTAKLYS AISLPQQLEH YKDYISRIQE IATSNNNSNA SAIISNGIYI VSAGSSDFIQ NYYINPLLYR DQSPDEFSDL
201: LILSYSSFIQ NLYSLGARRI GVTTLPPLGC LPAAITVVGP HEGGCSEKLN NDAISFNNKL NTTSQDLKRN LIGLNLVVFD IYQPLYDLAT RPSEFGFAEA
301: RRACCGTGLL ETSILCNPKS VGTCNNATEY VFWDGFHPTE AANKILADNL LVSGISLIS
101: KKAKGKNLLI GANFASAASG YYDGTAKLYS AISLPQQLEH YKDYISRIQE IATSNNNSNA SAIISNGIYI VSAGSSDFIQ NYYINPLLYR DQSPDEFSDL
201: LILSYSSFIQ NLYSLGARRI GVTTLPPLGC LPAAITVVGP HEGGCSEKLN NDAISFNNKL NTTSQDLKRN LIGLNLVVFD IYQPLYDLAT RPSEFGFAEA
301: RRACCGTGLL ETSILCNPKS VGTCNNATEY VFWDGFHPTE AANKILADNL LVSGISLIS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.