Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g066700.1.1 | Tomato | extracellular, plasma membrane | 95.47 | 94.93 |
| KRH26558 | Soybean | endoplasmic reticulum, extracellular, vacuole | 73.65 | 74.29 |
| KRH30531 | Soybean | extracellular, vacuole | 69.69 | 69.69 |
| CDY50286 | Canola | extracellular | 68.27 | 66.94 |
| CDY09169 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 68.27 | 66.76 |
| Bra020216.1-P | Field mustard | extracellular | 67.99 | 66.67 |
| PGSC0003DMT400088508 | Potato | extracellular | 30.03 | 66.67 |
| AT5G22810.1 | Thale cress | extracellular | 67.42 | 66.3 |
| KRH25150 | Soybean | extracellular | 56.94 | 65.69 |
| PGSC0003DMT400021670 | Potato | extracellular | 62.89 | 63.79 |
| GSMUA_Achr4P17640_001 | Banana | extracellular, plasma membrane | 62.04 | 61.17 |
| KRH22747 | Soybean | mitochondrion | 72.8 | 60.47 |
| Os03t0683800-01 | Rice | plastid | 59.77 | 59.1 |
| TraesCS4A01G285700.1 | Wheat | endoplasmic reticulum, plasma membrane | 58.07 | 58.07 |
| PGSC0003DMT400033798 | Potato | extracellular | 38.24 | 57.69 |
| HORVU4Hr1G004100.1 | Barley | endoplasmic reticulum, plasma membrane | 59.21 | 56.95 |
| TraesCS4D01G024900.1 | Wheat | endoplasmic reticulum, plasma membrane | 58.36 | 56.91 |
| TraesCS4B01G027100.1 | Wheat | endoplasmic reticulum, plasma membrane | 58.07 | 56.32 |
| Zm00001d033522_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 56.94 | 55.99 |
| EER93662 | Sorghum | endoplasmic reticulum, plasma membrane | 57.22 | 55.8 |
| PGSC0003DMT400006459 | Potato | extracellular | 55.52 | 54.6 |
| PGSC0003DMT400006461 | Potato | extracellular | 53.54 | 52.65 |
| GSMUA_Achr2P12520_001 | Banana | plastid | 58.36 | 52.02 |
| PGSC0003DMT400076811 | Potato | cytosol | 26.91 | 44.81 |
| PGSC0003DMT400027844 | Potato | extracellular | 14.73 | 34.9 |
| PGSC0003DMT400020220 | Potato | cytosol | 24.36 | 26.54 |
Protein Annotations
| EntrezGene:102586606 | Gene3D:3.40.50.1110 | MapMan:35.1 | InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016298 | GO:GO:0016787 | GO:GO:0016788 |
| InterPro:IPR036514 | InterPro:Lipase_GDSL_AS | UniProt:M0ZI47 | PFAM:PF00657 | EnsemblPlantsGene:PGSC0003DMG400000465 | PGSC:PGSC0003DMG400000465 |
| EnsemblPlants:PGSC0003DMT400001233 | ScanProsite:PS01098 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF288 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like |
| SUPFAM:SSF52266 | SignalP:SignalP-noTM | UniParc:UPI0002968B77 | RefSeq:XP_006349065.1 | SEG:seg | : |
Description
Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400000465]
Coordinates
chr11:-:39573287..39577406
Molecular Weight (calculated)
38476.5 Da
IEP (calculated)
8.882
GRAVY (calculated)
0.098
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MGISSLLRIY LFAFALDILI NIVNGQPLVP ALFIFGDSVV DAGNNNYLKT IVKANFPPYG RDFPKQIPTG RFCNGKLASD FTAENLGFTS YPPAYLSKKA
101: KGKNLLIGAN FASGSSGYYD TTSRLYDAIP LSKQLEYYKE YQKKLVVIAG KLNATSIING SIHLISAGSS DFVQNYYINP LLYKVYTPDQ FSDILIKSYT
201: KFILELYGLG ARKIGVTTVP PIGCLPASIT IFGKDNNNCV KKMNKVAISF NNKLNDTSIK LQKKLSGLNL VILDIYQPLL DLVTHPADNG FFEARKACCG
301: TGLLETSILC NANSPGTCAN ASEYVFWDGF HPTEAANKVL ADDLLASGLS LIS
101: KGKNLLIGAN FASGSSGYYD TTSRLYDAIP LSKQLEYYKE YQKKLVVIAG KLNATSIING SIHLISAGSS DFVQNYYINP LLYKVYTPDQ FSDILIKSYT
201: KFILELYGLG ARKIGVTTVP PIGCLPASIT IFGKDNNNCV KKMNKVAISF NNKLNDTSIK LQKKLSGLNL VILDIYQPLL DLVTHPADNG FFEARKACCG
301: TGLLETSILC NANSPGTCAN ASEYVFWDGF HPTEAANKVL ADDLLASGLS LIS
001: MGFSGIWLNL YVVFGSLMVF ERMVVMKAQP LVPAIFIFGD SVVDVGNNND IYTIVKANFP PYGRDFTTHT PTGRFCNGKL ATDFTAENLG FKSYPQAYLS
101: KKAKGKNLLI GANFASAASG YYDGTAKLYS AISLPQQLEH YKDYISRIQE IATSNNNSNA SAIISNGIYI VSAGSSDFIQ NYYINPLLYR DQSPDEFSDL
201: LILSYSSFIQ NLYSLGARRI GVTTLPPLGC LPAAITVVGP HEGGCSEKLN NDAISFNNKL NTTSQDLKRN LIGLNLVVFD IYQPLYDLAT RPSEFGFAEA
301: RRACCGTGLL ETSILCNPKS VGTCNNATEY VFWDGFHPTE AANKILADNL LVSGISLIS
101: KKAKGKNLLI GANFASAASG YYDGTAKLYS AISLPQQLEH YKDYISRIQE IATSNNNSNA SAIISNGIYI VSAGSSDFIQ NYYINPLLYR DQSPDEFSDL
201: LILSYSSFIQ NLYSLGARRI GVTTLPPLGC LPAAITVVGP HEGGCSEKLN NDAISFNNKL NTTSQDLKRN LIGLNLVVFD IYQPLYDLAT RPSEFGFAEA
301: RRACCGTGLL ETSILCNPKS VGTCNNATEY VFWDGFHPTE AANKILADNL LVSGISLIS
Arabidopsis Description
GDSL-like Lipase/Acylhydrolase superfamily protein [Source:TAIR;Acc:AT5G22810]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.