Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400088508 | Potato | extracellular | 33.56 | 31.45 |
| PGSC0003DMT400076811 | Potato | cytosol | 33.56 | 23.58 |
| PGSC0003DMT400006461 | Potato | extracellular | 36.24 | 15.04 |
| PGSC0003DMT400021670 | Potato | extracellular | 34.9 | 14.94 |
| PGSC0003DMT400006459 | Potato | extracellular | 35.57 | 14.76 |
| PGSC0003DMT400001233 | Potato | extracellular, plasma membrane | 34.9 | 14.73 |
| PGSC0003DMT400020220 | Potato | cytosol | 26.85 | 12.35 |
| HORVU3Hr1G089960.1 | Barley | plastid | 16.11 | 11.71 |
| PGSC0003DMT400033798 | Potato | extracellular | 5.37 | 3.42 |
| Solyc05g043310.1.1 | Tomato | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400027844 | EnsemblPlantsGene:PGSC0003DMG400010722 | Gene3D:3.40.50.1110 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| GO:GO:0016788 | InterPro:GDSL | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF261 |
| PFAM:PF00657 | PGSC:PGSC0003DMG400010722 | SUPFAM:SSF52266 | UniParc:UPI00029600FC | UniProt:M1AQ92 | MapMan:35.1 |
Description
GDSL esterase/lipase [Source:PGSC_GENE;Acc:PGSC0003DMG400010722]
Coordinates
chr2:-:32824508..32825052
Molecular Weight (calculated)
16612.3 Da
IEP (calculated)
5.770
GRAVY (calculated)
0.111
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEGARVIGI VGLPPMGCLP VVITMKTAGS PLQPRQCIDS YSDVGKEYNQ LLQNMLKNMI TYGTKIIYAD IYNPFYDMVQ NPNKYGFNNV YSGCCGTGLF
101: ELALLCNPNS LVCINASEYI FWDAVHPTQA TYYNLFNSLR PTVDVMLKL
101: ELALLCNPNS LVCINASEYI FWDAVHPTQA TYYNLFNSLR PTVDVMLKL
001: MRSHHRHFSS YVSFILFLFL FFISFSSSTS KLEPAKSEPK RKHSVSAILV FGDSTVDPGN NNYIDTVFKC NFPPYGLDFR NKTPTGRFCN GRLVTDFIAS
101: YIGVKENVPP YLDPNLGINE LISGVSFASA GSGYDPLTPT ITNVIDIPTQ LEYFREYKRK LEGKMGKQEM EKHIEEAMFC VSAGTNDFVI NYFTIPIRRK
201: TFTIEAYQQF VISNLKQFIQ GLWKEGARKI TVAGLPPIGC LPIVITLFSG EALTNRRCID RFSTVATNYN FLLQKQLALM QVGLAHLGSK IFYLDVYNPV
301: YEVIRDPRKF GFEEVFSGCC GSGYLEASFL CNPKSYVCPN TSAYVFFDSI HPSEKTYFSL FRSLRPIYDS ILGSF
101: YIGVKENVPP YLDPNLGINE LISGVSFASA GSGYDPLTPT ITNVIDIPTQ LEYFREYKRK LEGKMGKQEM EKHIEEAMFC VSAGTNDFVI NYFTIPIRRK
201: TFTIEAYQQF VISNLKQFIQ GLWKEGARKI TVAGLPPIGC LPIVITLFSG EALTNRRCID RFSTVATNYN FLLQKQLALM QVGLAHLGSK IFYLDVYNPV
301: YEVIRDPRKF GFEEVFSGCC GSGYLEASFL CNPKSYVCPN TSAYVFFDSI HPSEKTYFSL FRSLRPIYDS ILGSF
Arabidopsis Description
GDSL esterase/lipase At5g45960 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ40]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.