Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g008690.1.1 | Tomato | extracellular | 93.16 | 93.16 |
| PGSC0003DMT400021670 | Potato | extracellular | 68.38 | 45.98 |
| VIT_08s0007g04300.t01 | Wine grape | extracellular, vacuole | 67.09 | 43.25 |
| PGSC0003DMT400001233 | Potato | extracellular, plasma membrane | 57.69 | 38.24 |
| GSMUA_Achr4P17640_001 | Banana | extracellular, plasma membrane | 56.41 | 36.87 |
| CDX95394 | Canola | extracellular | 54.27 | 36.18 |
| Bra040686.1-P | Field mustard | extracellular, plasma membrane | 53.85 | 35.9 |
| CDX76226 | Canola | extracellular, plasma membrane | 53.85 | 35.9 |
| AT3G53100.1 | Thale cress | extracellular | 53.85 | 35.9 |
| GSMUA_Achr2P12520_001 | Banana | plastid | 54.7 | 32.32 |
| PGSC0003DMT400006461 | Potato | extracellular | 49.15 | 32.03 |
| TraesCS4A01G285700.1 | Wheat | endoplasmic reticulum, plasma membrane | 48.29 | 32.01 |
| PGSC0003DMT400006459 | Potato | extracellular | 48.72 | 31.75 |
| Os03t0683800-01 | Rice | plastid | 48.29 | 31.65 |
| TraesCS4D01G024900.1 | Wheat | endoplasmic reticulum, plasma membrane | 48.29 | 31.22 |
| HORVU4Hr1G004100.1 | Barley | endoplasmic reticulum, plasma membrane | 48.72 | 31.06 |
| TraesCS4B01G027100.1 | Wheat | endoplasmic reticulum, plasma membrane | 48.29 | 31.04 |
| EER93662 | Sorghum | endoplasmic reticulum, plasma membrane | 47.86 | 30.94 |
| Zm00001d033522_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 46.15 | 30.08 |
| PGSC0003DMT400076811 | Potato | cytosol | 13.68 | 15.09 |
| PGSC0003DMT400020220 | Potato | cytosol | 17.52 | 12.65 |
| PGSC0003DMT400088508 | Potato | extracellular | 7.26 | 10.69 |
| PGSC0003DMT400027844 | Potato | extracellular | 3.42 | 5.37 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400033798 | EnsemblPlantsGene:PGSC0003DMG400012986 | Gene3D:3.40.50.1110 | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF288 | PGSC:PGSC0003DMG400012986 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI000295B5C2 | UniProt:M1AZP5 |
| MapMan:35.1 | : | : | : | : | : |
Description
Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400012986]
Coordinates
chr9:-:4329469..4330345
Molecular Weight (calculated)
26294.7 Da
IEP (calculated)
9.629
GRAVY (calculated)
0.011
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFLMSLLGG FLLAMVFSVS NGDPLVPALC IFGDSVVDVG NNNNLSTLIK ANFPPYGRDF VTHKPTGRFC NGKLATDFTA DYLGFTSYPP AYLSREARGK
101: RVLTGVNFAS AASGYYERTA RLFRALTLTH QLKYYKLWQR KVVNLVGRTN ATNIFSRGIH LISAGSSDFM QNYYINPLLN RVYSPDQFSD ILMKSYSTFV
201: QVQLPLLCTN CYHFFNCYHK LILKSEQPAG NYFA
101: RVLTGVNFAS AASGYYERTA RLFRALTLTH QLKYYKLWQR KVVNLVGRTN ATNIFSRGIH LISAGSSDFM QNYYINPLLN RVYSPDQFSD ILMKSYSTFV
201: QVQLPLLCTN CYHFFNCYHK LILKSEQPAG NYFA
001: MQKMRVSGFR VLLLVSCFFC KSKGAVVPAL IMFGDSIVDV GNNNNLLSIV KSNFLPYGRD FIDQRPTGRF CNGKLAVDFS AEYLGFSSYP PAFLSREASN
101: ENILIGANFA SASSGYYDAT SVPFGSISLT RQLSYYRAYQ NRVTRMIGRG NARILFSRGI HILSAGSSDF LQNYYINPLL NILNTPDQFA DILLRSFSEF
201: IQNLYELGAR RIGVISLPPM GCLPAAITLF GAGNKSCVER LNNDAIMFNT KLENTTRLLM NRHSGLRLVA FNVYQPFLDI ITNPTDNGFF ETKRACCGTG
301: TIETSFLCNS LSFGTCVNAT GYVFWDGFHP TEAVNELLAG QLLGQGISLI N
101: ENILIGANFA SASSGYYDAT SVPFGSISLT RQLSYYRAYQ NRVTRMIGRG NARILFSRGI HILSAGSSDF LQNYYINPLL NILNTPDQFA DILLRSFSEF
201: IQNLYELGAR RIGVISLPPM GCLPAAITLF GAGNKSCVER LNNDAIMFNT KLENTTRLLM NRHSGLRLVA FNVYQPFLDI ITNPTDNGFF ETKRACCGTG
301: TIETSFLCNS LSFGTCVNAT GYVFWDGFHP TEAVNELLAG QLLGQGISLI N
Arabidopsis Description
GDSL esterase/lipase At3g53100 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPI9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.