CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76226	Canola	extracellular, plasma membrane	96.01	96.01
AT3G53100.1	Thale cress	extracellular	86.89	86.89
PGSC0003DMT400088508	Potato	extracellular	29.06	64.15
Solyc10g085740.1.1	Tomato	extracellular	61.82	62.36
PGSC0003DMT400021670	Potato	extracellular	61.82	62.36
VIT_08s0007g04300.t01	Wine grape	extracellular, vacuole	61.82	59.78
CDX80889	Canola	extracellular, plasma membrane	60.11	59.77
CDY04898	Canola	extracellular, plasma membrane	58.97	59.14
CDY14175	Canola	extracellular, plasma membrane	54.13	58.1
GSMUA_Achr4P17640_001	Banana	extracellular, plasma membrane	59.26	58.1
CDY09169	Canola	endoplasmic reticulum, extracellular, plasma membrane	58.69	57.06
TraesCS4A01G285700.1	Wheat	endoplasmic reticulum, plasma membrane	57.27	56.94
CDY50286	Canola	extracellular	58.12	56.67
EER93662	Sorghum	endoplasmic reticulum, plasma membrane	57.83	56.08
CDY11271	Canola	extracellular, plasma membrane	58.4	55.86
Zm00001d033522_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	56.98	55.71
Solyc09g008690.1.1	Tomato	extracellular	37.04	55.56
Os03t0683800-01	Rice	plastid	56.41	55.46
TraesCS4D01G024900.1	Wheat	endoplasmic reticulum, plasma membrane	56.7	54.97
TraesCS4B01G027100.1	Wheat	endoplasmic reticulum, plasma membrane	56.7	54.67
PGSC0003DMT400033798	Potato	extracellular	36.18	54.27
HORVU4Hr1G004100.1	Barley	endoplasmic reticulum, plasma membrane	56.7	54.22
GSMUA_Achr2P12520_001	Banana	plastid	59.83	53.03
CDY30167	Canola	extracellular	52.14	51.69
CDY56196	Canola	vacuole	52.71	51.68
CDY39070	Canola	extracellular	15.95	37.84
CDX85927	Canola	extracellular, mitochondrion, plastid	14.53	36.96
CDY30744	Canola	extracellular	33.62	34.91
CDY45740	Canola	plasma membrane	33.33	34.62
CDX72994	Canola	extracellular	31.91	33.04
CDX75880	Canola	vacuole	29.06	32.9
CDX96486	Canola	extracellular, plasma membrane	31.62	32.74
CDY15393	Canola	cytosol	19.94	31.82
CDY67583	Canola	extracellular	31.05	31.78
CDY25788	Canola	extracellular	29.91	30.79
CDY04705	Canola	cytosol, mitochondrion, plasma membrane, plastid	31.05	30.7
CDY44153	Canola	cytosol	30.77	30.68
CDY15394	Canola	extracellular	10.54	30.33
CDY43409	Canola	extracellular, plasma membrane	29.34	30.29
CDY54289	Canola	extracellular	27.92	28.49
CDY45771	Canola	extracellular, plasma membrane	27.64	28.45
CDY39069	Canola	extracellular, plasma membrane	27.07	27.86
CDY13524	Canola	extracellular, plasma membrane	27.07	27.86
CDY67584	Canola	extracellular, plasma membrane	27.07	27.86
CDX89030	Canola	plasma membrane	23.65	27.67
CDY13523	Canola	golgi, plasma membrane, plastid	25.93	26.22
CDY57589	Canola	plasma membrane	29.63	22.27
CDY54290	Canola	extracellular	18.8	21.93

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	GO:A0A078E4D8	EnsemblPlants:CDX95394	ProteinID:CDX95394	ProteinID:CDX95394.1
InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787	GO:GO:0016788	EnsemblPlantsGene:GSBRNA2T00101117001
InterPro:IPR036514	PFAM:PF00657	PFscan:PS51257	PANTHER:PTHR22835	PANTHER:PTHR22835:SF146	InterPro:SGNH_hydro_sf
InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM	UniParc:UPI0004EF150A	:	:

Description

BnaC04g27640D

Coordinates

chrLK031888:-:1096461..1098230

Molecular Weight (calculated)

38792.6 Da

IEP (calculated)

8.116

GRAVY (calculated)

0.037

Length

351 amino acids

Sequence
(BLAST)

001: MQEMRVSGFW VLLLVSCLIC KSKGAIVPAL IMFGDSIVDV GNNNNLLSIV KSNFPPYGRD FTNRTPTGRF CNGKLAVDFS AEYLGFPSYP PAYLSREARN
101: EDFLIGANFA SASSGYYDAT SVPFGAIPLP RQLSYYRTYQ NRVRSMIGRE RARTMFSKSI HILSAGSSDF LQNYYVNPLL NILNTPDQFS DILMRSYSEF
201: IQNLYELGAR RIGVISLPPM GCLPAAITLF GAGNKSCVER LNNDAVMFNT KLEATTQALM KRHSGLKLVA FNAYQPLMDI ITNPYDNGFF ETKRACCGTG
301: TIETSFLCNS LSLGTCSNAT GYVFWDGFHP TEAVYELLAG QLLSQGISLI S

Best Arabidopsis Sequence Match ( AT3G53100.1 )
(BLAST)

001: MQKMRVSGFR VLLLVSCFFC KSKGAVVPAL IMFGDSIVDV GNNNNLLSIV KSNFLPYGRD FIDQRPTGRF CNGKLAVDFS AEYLGFSSYP PAFLSREASN
101: ENILIGANFA SASSGYYDAT SVPFGSISLT RQLSYYRAYQ NRVTRMIGRG NARILFSRGI HILSAGSSDF LQNYYINPLL NILNTPDQFA DILLRSFSEF
201: IQNLYELGAR RIGVISLPPM GCLPAAITLF GAGNKSCVER LNNDAIMFNT KLENTTRLLM NRHSGLRLVA FNVYQPFLDI ITNPTDNGFF ETKRACCGTG
301: TIETSFLCNS LSFGTCVNAT GYVFWDGFHP TEAVNELLAG QLLGQGISLI N

Arabidopsis Description

GDSL esterase/lipase At3g53100 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPI9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.