Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G16370.1 | CDY03088 | AT2G01950.1 | 19000166 |
| AT3G16370.1 | CDY17621 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027168.1-P | Field mustard | extracellular | 98.88 | 100.0 |
| CDY30167 | Canola | extracellular | 98.04 | 99.15 |
| AT3G16370.1 | Thale cress | endoplasmic reticulum, vacuole | 87.99 | 89.24 |
| KRH23361 | Soybean | nucleus | 71.51 | 72.52 |
| KRH47190 | Soybean | nucleus | 70.67 | 71.67 |
| KRH44252 | Soybean | nucleus | 71.51 | 70.14 |
| KRH09971 | Soybean | nucleus | 66.76 | 69.88 |
| VIT_09s0002g03140.t01 | Wine grape | extracellular | 69.27 | 69.66 |
| Solyc03g121180.2.1 | Tomato | nucleus | 68.72 | 68.52 |
| PGSC0003DMT400006459 | Potato | extracellular | 68.44 | 68.25 |
| Os06t0148200-01 | Rice | extracellular | 64.8 | 66.1 |
| PGSC0003DMT400006461 | Potato | extracellular | 63.69 | 63.51 |
| GSMUA_Achr7P08930_001 | Banana | endoplasmic reticulum, extracellular | 63.13 | 62.95 |
| GSMUA_Achr2P16800_001 | Banana | extracellular, vacuole | 62.85 | 62.85 |
| TraesCS4A01G397000.1 | Wheat | extracellular | 61.45 | 62.68 |
| TraesCS7D01G093200.1 | Wheat | extracellular | 61.45 | 62.68 |
| EER87840 | Sorghum | extracellular, vacuole | 62.57 | 62.22 |
| TraesCS7A01G097100.1 | Wheat | golgi | 60.89 | 62.11 |
| Zm00001d011661_P001 | Maize | extracellular | 61.17 | 61.34 |
| VIT_09s0002g03150.t01 | Wine grape | extracellular | 58.66 | 59.15 |
| CDX80889 | Canola | extracellular, plasma membrane | 56.15 | 56.94 |
| HORVU7Hr1G021310.7 | Barley | extracellular | 61.45 | 55.84 |
| HORVU7Hr1G021630.2 | Barley | cytosol, plastid | 42.18 | 55.72 |
| CDY09169 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 56.15 | 55.68 |
| CDY50286 | Canola | extracellular | 55.87 | 55.56 |
| CDY04898 | Canola | extracellular, plasma membrane | 53.63 | 54.86 |
| Solyc03g121170.2.1 | Tomato | nucleus | 63.41 | 54.44 |
| TraesCS7D01G094000.1 | Wheat | extracellular | 52.51 | 53.56 |
| HORVU7Hr1G021460.4 | Barley | extracellular | 52.51 | 53.41 |
| CDY11271 | Canola | extracellular, plasma membrane | 54.75 | 53.41 |
| CDY14175 | Canola | extracellular, plasma membrane | 48.6 | 53.21 |
| TraesCS4A01G397900.1 | Wheat | extracellular | 52.51 | 53.11 |
| CDX95394 | Canola | extracellular | 51.68 | 52.71 |
| TraesCS7D01G094500.1 | Wheat | extracellular | 51.96 | 52.69 |
| TraesCS4A01G398600.1 | Wheat | extracellular | 51.68 | 52.41 |
| HORVU2Hr1G002340.1 | Barley | cytosol, plastid | 37.43 | 51.94 |
| CDX75880 | Canola | vacuole | 44.97 | 51.94 |
| TraesCS4A01G398500.1 | Wheat | plasma membrane | 51.12 | 51.84 |
| HORVU7Hr1G021580.1 | Barley | extracellular | 51.12 | 51.84 |
| TraesCS7A01G099900.1 | Wheat | extracellular, golgi, plasma membrane | 51.96 | 51.81 |
| CDX76226 | Canola | extracellular, plasma membrane | 50.56 | 51.57 |
| TraesCS4A01G398700.1 | Wheat | extracellular | 51.4 | 51.4 |
| Zm00001d036175_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 51.4 | 51.25 |
| EER87852 | Sorghum | extracellular | 51.4 | 50.97 |
| TraesCS4A01G399300.1 | Wheat | endoplasmic reticulum | 50.84 | 50.28 |
| HORVU7Hr1G021620.2 | Barley | endoplasmic reticulum, golgi, mitochondrion | 51.12 | 49.73 |
| TraesCS7D01G094900.1 | Wheat | endoplasmic reticulum, golgi | 50.28 | 49.72 |
| TraesCS7A01G100600.1 | Wheat | endoplasmic reticulum, golgi | 50.56 | 49.45 |
| TraesCS3D01G431500.1 | Wheat | endoplasmic reticulum, golgi | 51.12 | 46.33 |
| TraesCS7A01G100200.1 | Wheat | extracellular | 42.74 | 45.27 |
| Os06t0149100-01 | Rice | cytosol | 19.55 | 42.68 |
| HORVU0Hr1G019420.1 | Barley | endoplasmic reticulum, mitochondrion | 27.65 | 42.67 |
| CDY15394 | Canola | extracellular | 12.85 | 37.7 |
| CDX85927 | Canola | extracellular, mitochondrion, plastid | 13.69 | 35.51 |
| CDY30744 | Canola | extracellular | 32.96 | 34.91 |
| CDY45740 | Canola | plasma membrane | 32.96 | 34.91 |
| CDY67584 | Canola | extracellular, plasma membrane | 32.68 | 34.31 |
| CDY25788 | Canola | extracellular | 32.68 | 34.31 |
| CDY39069 | Canola | extracellular, plasma membrane | 32.68 | 34.31 |
| CDY13524 | Canola | extracellular, plasma membrane | 32.68 | 34.31 |
| CDY44153 | Canola | cytosol | 33.52 | 34.09 |
| CDX72994 | Canola | extracellular | 32.12 | 33.92 |
| CDX96486 | Canola | extracellular, plasma membrane | 32.12 | 33.92 |
| CDY39070 | Canola | extracellular | 13.97 | 33.78 |
| CDY45771 | Canola | extracellular, plasma membrane | 31.84 | 33.43 |
| CDY15393 | Canola | cytosol | 20.39 | 33.18 |
| CDY04705 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 32.68 | 32.96 |
| CDY54289 | Canola | extracellular | 31.56 | 32.85 |
| CDY43409 | Canola | extracellular, plasma membrane | 30.73 | 32.35 |
| CDX89030 | Canola | plasma membrane | 27.09 | 32.33 |
| CDY67583 | Canola | extracellular | 30.45 | 31.78 |
| CDY13523 | Canola | golgi, plasma membrane, plastid | 26.26 | 27.09 |
| CDY57589 | Canola | plasma membrane | 30.17 | 23.13 |
| CDY54290 | Canola | extracellular | 18.99 | 22.59 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | GO:A0A078IZV0 | UniProt:A0A078IZV0 | EnsemblPlants:CDY56196 | ProteinID:CDY56196 |
| ProteinID:CDY56196.1 | ncoils:Coil | InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| GO:GO:0016788 | EnsemblPlantsGene:GSBRNA2T00017965001 | InterPro:IPR036514 | PFAM:PF00657 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF134 |
| InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | SignalP:SignalP-noTM | UniParc:UPI0004EE703C | SEG:seg |
Description
BnaA05g36890DBnaA05g36890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZV0]
Coordinates
chrLK033468:+:17074..18901
Molecular Weight (calculated)
38833.3 Da
IEP (calculated)
8.338
GRAVY (calculated)
-0.031
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHRMTSCLL LLLVSTYSVL QISFAQDAPT SLFPGMIIFG DSVVDVGNNN YLPTLFRADY PPYGRDFAGH KPTGRFCNGK LATDITAETL GFTKYPPAYL
101: SPEASGKNLL IGANFASAAS GYDDKAALLN HAIPLYQQVE YYKEYKSKLI KVAGSKQADT IIKGSIYLLS AGSSDFVQNY YVNPLVNKFY TADQYGSMLI
201: DNFSTFIKQV YAVGARKIGV TSLPPTGCLP AARTLFGYHE KGCVSRLNTD AQQFNKKLNA AASKLQKQYS GLKIVVFDIF TPLYDLVQSP AKSGFTEATK
301: GCCGTGTVET TSLLCNPKSY GTCTNATQYV FWDSVHPSEA ANEILATSLI GQGFSLIG
101: SPEASGKNLL IGANFASAAS GYDDKAALLN HAIPLYQQVE YYKEYKSKLI KVAGSKQADT IIKGSIYLLS AGSSDFVQNY YVNPLVNKFY TADQYGSMLI
201: DNFSTFIKQV YAVGARKIGV TSLPPTGCLP AARTLFGYHE KGCVSRLNTD AQQFNKKLNA AASKLQKQYS GLKIVVFDIF TPLYDLVQSP AKSGFTEATK
301: GCCGTGTVET TSLLCNPKSY GTCTNATQYV FWDSVHPSEA ANEILATSLI GQGFSLIG
001: MDRCTSSFLL LTLVSTLSIL QISFAQLVPA IMTFGDSVVD VGNNNYLPTL FRADYPPYGR DFANHKATGR FCNGKLATDI TAETLGFTKY PPAYLSPEAS
101: GKNLLIGANF ASAASGYDDK AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIIKGA ICLLSAGSSD FVQNYYVNPL LYKVYTVDAY GSFLIDNFST
201: FIKQVYAVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVS RLNTDAQNFN KKLNAAASKL QKQYSDLKIV VFDIYSPLYD LVQNPSKSGF TEATKGCCGT
301: GTVETTSLLC NPKSFGTCSN ATQYVFWDSV HPSEAANEIL ATALIGQGFS LLG
101: GKNLLIGANF ASAASGYDDK AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIIKGA ICLLSAGSSD FVQNYYVNPL LYKVYTVDAY GSFLIDNFST
201: FIKQVYAVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVS RLNTDAQNFN KKLNAAASKL QKQYSDLKIV VFDIYSPLYD LVQNPSKSGF TEATKGCCGT
301: GTVETTSLLC NPKSFGTCSN ATQYVFWDSV HPSEAANEIL ATALIGQGFS LLG
Arabidopsis Description
APGGDSL esterase/lipase APG [Source:UniProtKB/Swiss-Prot;Acc:Q9LU14]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.