Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os10t0114400-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G16370.1 | Os10t0114400-01 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G019420.1 | Barley | endoplasmic reticulum, mitochondrion | 49.39 | 34.91 |
| EER87852 | Sorghum | extracellular | 68.9 | 31.3 |
| Zm00001d036175_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 67.68 | 30.92 |
| TraesCS7D01G094900.1 | Wheat | endoplasmic reticulum, golgi | 65.24 | 29.56 |
| TraesCS4A01G399300.1 | Wheat | endoplasmic reticulum | 64.63 | 29.28 |
| TraesCS7A01G100600.1 | Wheat | endoplasmic reticulum, golgi | 65.24 | 29.23 |
| HORVU7Hr1G021620.2 | Barley | endoplasmic reticulum, golgi, mitochondrion | 63.41 | 28.26 |
| TraesCS3D01G431500.1 | Wheat | endoplasmic reticulum, golgi | 65.24 | 27.09 |
| GSMUA_Achr2P16800_001 | Banana | extracellular, vacuole | 47.56 | 21.79 |
| Os06t0148200-01 | Rice | extracellular | 45.73 | 21.37 |
| VIT_09s0002g03150.t01 | Wine grape | extracellular | 45.12 | 20.85 |
| VIT_09s0002g03140.t01 | Wine grape | extracellular | 45.12 | 20.79 |
| KRH23361 | Soybean | nucleus | 44.51 | 20.68 |
| GSMUA_Achr7P08930_001 | Banana | endoplasmic reticulum, extracellular | 45.12 | 20.61 |
| KRH47190 | Soybean | nucleus | 43.9 | 20.4 |
| KRH09971 | Soybean | nucleus | 42.07 | 20.18 |
| AT3G16370.1 | Thale cress | endoplasmic reticulum, vacuole | 42.68 | 19.83 |
| Bra027168.1-P | Field mustard | extracellular | 42.68 | 19.77 |
| KRH44252 | Soybean | nucleus | 43.9 | 19.73 |
| Os03t0683800-01 | Rice | plastid | 42.68 | 19.61 |
| CDY56196 | Canola | vacuole | 42.68 | 19.55 |
| CDY30167 | Canola | extracellular | 42.07 | 19.49 |
| PGSC0003DMT400006461 | Potato | extracellular | 41.46 | 18.94 |
| Solyc03g121180.2.1 | Tomato | nucleus | 41.46 | 18.94 |
| PGSC0003DMT400006459 | Potato | extracellular | 41.46 | 18.94 |
| Solyc03g121170.2.1 | Tomato | nucleus | 41.46 | 16.31 |
| CDX75880 | Canola | vacuole | 6.1 | 3.23 |
| Os06t0148600-01 | Rice | cytosol, golgi, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os06t0149100-01 | EnsemblPlantsGene:Os06g0149100 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF251 | ProteinID:BAS96167.1 | UniParc:UPI000393AB4B |
| UniProt:A0A0P0WSV9 | MapMan:35.1 | : | : | : | : |
Description
GDSL ESTERASE/LIPASE PROTEIN 75Similar to mRNA, clone: RTFL01-05-E01. (Os06t0149100-01)
Coordinates
chr6:+:2546952..2549251
Molecular Weight (calculated)
17729.5 Da
IEP (calculated)
6.072
GRAVY (calculated)
-0.171
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: YDAAETLGFE SYAPPYLSPQ AKGDNLLLGA NFASAASSYH DDTAAMYDAI TLTQQLKYYK EYQSKLAALI GQKNATAILS DALYIVSTGT GDFIQNYYHN
101: ASLSSRYNVN SYCDLLISIF SGFANVGGAA DWCHVSAAAG LSACHNQAVW QGPQRVRGEA QRRC
101: ASLSSRYNVN SYCDLLISIF SGFANVGGAA DWCHVSAAAG LSACHNQAVW QGPQRVRGEA QRRC
001: MNKMKMFIIM LMTFSVIACF YAGVGTGEPL VPALIIMGDS VVDAGNNNRL NTLIKANFPP YGRDFLAHNA TGRFSNGKLA TDFTAESLGF TSYPVPYLSQ
101: EANGTNLLTG ANFASGASGY DDGTAIFYNA ITLNQQLKNY KEYQNKVTNI VGSERANKIF SGAIHLLSTG SSDFLQSYYI NPILNRIFTP DQYSDRLMKP
201: YSTFVQNLYD LGARKIGVTT LPPLGCLPAA ITLFGETGNN NTCVERLNQD AVSFNTKLNN TSMNLTNNLP GLKLVVFDIY NPLLNMAMNP VENGFFESRR
301: ACCGTGTVET SFLCNARSVG TCSNATNYVF WDGFHPSEAA NRVIANNLLV QGIPLIS
101: EANGTNLLTG ANFASGASGY DDGTAIFYNA ITLNQQLKNY KEYQNKVTNI VGSERANKIF SGAIHLLSTG SSDFLQSYYI NPILNRIFTP DQYSDRLMKP
201: YSTFVQNLYD LGARKIGVTT LPPLGCLPAA ITLFGETGNN NTCVERLNQD AVSFNTKLNN TSMNLTNNLP GLKLVVFDIY NPLLNMAMNP VENGFFESRR
301: ACCGTGTVET SFLCNARSVG TCSNATNYVF WDGFHPSEAA NRVIANNLLV QGIPLIS
Arabidopsis Description
GDSL-like Lipase/Acylhydrolase family protein [Source:TAIR;Acc:AT5G03820]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.