Factsheet for GSMUA_Achr7P08930_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr2P15100_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G16370.1	GSMUA_Achr2P15100_001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P16800_001	Banana	extracellular, vacuole	81.62	81.84
Os06t0148200-01	Rice	extracellular	72.7	74.36
Zm00001d011661_P001	Maize	extracellular	71.59	71.99
EER87840	Sorghum	extracellular, vacuole	71.87	71.67
VIT_09s0002g03140.t01	Wine grape	extracellular	70.19	70.79
KRH47190	Soybean	nucleus	68.8	69.97
TraesCS7D01G093200.1	Wheat	extracellular	68.25	69.8
TraesCS4A01G397000.1	Wheat	extracellular	68.25	69.8
TraesCS7A01G097100.1	Wheat	golgi	67.69	69.23
KRH23361	Soybean	nucleus	67.13	68.27
Solyc03g121180.2.1	Tomato	nucleus	67.69	67.69
PGSC0003DMT400006459	Potato	extracellular	67.69	67.69
KRH44252	Soybean	nucleus	68.25	67.12
KRH09971	Soybean	nucleus	62.67	65.79
AT3G16370.1	Thale cress	endoplasmic reticulum, vacuole	64.62	65.72
HORVU7Hr1G021630.2	Barley	cytosol, plastid	48.19	63.84
Bra027168.1-P	Field mustard	extracellular	62.67	63.56
CDY56196	Canola	vacuole	62.95	63.13
CDY30167	Canola	extracellular	62.12	62.99
HORVU7Hr1G021310.7	Barley	extracellular	68.8	62.69
PGSC0003DMT400006461	Potato	extracellular	62.67	62.67
TraesCS7D01G094500.1	Wheat	extracellular	59.05	60.06
GSMUA_Achr4P17640_001	Banana	extracellular, plasma membrane	59.89	60.06
HORVU7Hr1G021460.4	Barley	extracellular	58.77	59.94
TraesCS4A01G398700.1	Wheat	extracellular	59.05	59.22
TraesCS4A01G398500.1	Wheat	plasma membrane	58.22	59.21
VIT_09s0002g03150.t01	Wine grape	extracellular	58.5	59.15
TraesCS7A01G099900.1	Wheat	extracellular, golgi, plasma membrane	58.77	58.77
TraesCS7D01G094000.1	Wheat	extracellular	56.82	58.12
TraesCS4A01G397900.1	Wheat	extracellular	56.55	57.34
TraesCS4A01G398600.1	Wheat	extracellular	56.27	57.22
HORVU7Hr1G021580.1	Barley	extracellular	55.71	56.66
HORVU2Hr1G002340.1	Barley	cytosol, plastid	40.67	56.59
Zm00001d036175_P001	Maize	endoplasmic reticulum, extracellular, vacuole	55.99	55.99
EER87852	Sorghum	extracellular	55.99	55.68
Solyc03g121170.2.1	Tomato	nucleus	62.95	54.2
TraesCS4A01G399300.1	Wheat	endoplasmic reticulum	53.2	52.76
TraesCS7D01G094900.1	Wheat	endoplasmic reticulum, golgi	52.65	52.21
TraesCS7A01G100600.1	Wheat	endoplasmic reticulum, golgi	53.2	52.19
GSMUA_Achr2P12520_001	Banana	plastid	57.38	52.02
HORVU7Hr1G021620.2	Barley	endoplasmic reticulum, golgi, mitochondrion	52.65	51.36
TraesCS7A01G100200.1	Wheat	extracellular	47.63	50.59
TraesCS3D01G431500.1	Wheat	endoplasmic reticulum, golgi	53.48	48.61
Os06t0149100-01	Rice	cytosol	20.61	45.12
HORVU0Hr1G019420.1	Barley	endoplasmic reticulum, mitochondrion	28.13	43.53
CDX75880	Canola	vacuole	33.43	38.71

Protein Annotations

EnsemblPlants:GSMUA_Achr7P08930_001	EnsemblPlants:GSMUA_Achr7T08930_001	EnsemblPlantsGene:GSMUA_Achr7G08930_001	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF134	PFAM:PF00657	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52266
UniParc:UPI000294E375	UniProt:M0TFY1	MapMan:35.1	:	:	:

Description

GDSL esterase/lipase APG [Source:GMGC_GENE;Acc:GSMUA_Achr7G08930_001]

Coordinates

chr7:+:7315658..7317469

Molecular Weight (calculated)

38626.7 Da

IEP (calculated)

7.766

GRAVY (calculated)

-0.001

Length

359 amino acids

Sequence
(BLAST)

001: MAKSGNSAVG ALLALALFLL RPIGGNAQAS SALVPAIITF GDSTVDVGNN DYLKTIFKAD FPPYGRDFKN HKPTGRFCNG KLATDITADT LGFSSYPSAY
101: LSPEASGKNL LIGANFASAA SGYYDDTAYL YHAIPLSQQL EFYKEYQHKL SRVAGTSKAS SIISGALYIV STGASDFVQN YYINPHLYET RSPDQFSSFL
201: VHIFCNFVKD LYGLGARKIG VTSLPPLGCL PASITLFGHG SNECVRRLNS DAQNFNRKLN TAADSLAKQL PNLKIAIFDI YKPLHDLATK PSDFGFFEAR
301: RGCCGTGTVE TTSFLCNPHS VGTCANATGY VFWDSVHPSE SANQVLADSL IAQGINLIL

Best Arabidopsis Sequence Match ( AT3G16370.1 )
(BLAST)

001: MDRCTSSFLL LTLVSTLSIL QISFAQLVPA IMTFGDSVVD VGNNNYLPTL FRADYPPYGR DFANHKATGR FCNGKLATDI TAETLGFTKY PPAYLSPEAS
101: GKNLLIGANF ASAASGYDDK AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIIKGA ICLLSAGSSD FVQNYYVNPL LYKVYTVDAY GSFLIDNFST
201: FIKQVYAVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVS RLNTDAQNFN KKLNAAASKL QKQYSDLKIV VFDIYSPLYD LVQNPSKSGF TEATKGCCGT
301: GTVETTSLLC NPKSFGTCSN ATQYVFWDSV HPSEAANEIL ATALIGQGFS LLG

Arabidopsis Description

APGGDSL esterase/lipase APG [Source:UniProtKB/Swiss-Prot;Acc:Q9LU14]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.