Factsheet for Os06t0148200-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 19226311

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os10t0114400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G16370.1	Os10t0114400-01	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G093200.1	Wheat	extracellular	82.34	82.34
TraesCS4A01G397000.1	Wheat	extracellular	82.05	82.05
EER87840	Sorghum	extracellular, vacuole	84.05	81.94
TraesCS7A01G097100.1	Wheat	golgi	81.48	81.48
Zm00001d011661_P001	Maize	extracellular	81.77	80.39
HORVU7Hr1G021310.7	Barley	extracellular	81.77	72.84
GSMUA_Achr7P08930_001	Banana	endoplasmic reticulum, extracellular	74.36	72.7
GSMUA_Achr2P16800_001	Banana	extracellular, vacuole	73.5	72.07
HORVU7Hr1G021630.2	Barley	cytosol, plastid	54.7	70.85
VIT_09s0002g03140.t01	Wine grape	extracellular	70.66	69.66
TraesCS7D01G094500.1	Wheat	extracellular	68.95	68.56
TraesCS4A01G398500.1	Wheat	plasma membrane	68.38	67.99
HORVU7Hr1G021460.4	Barley	extracellular	68.09	67.9
KRH47190	Soybean	nucleus	67.81	67.42
TraesCS7D01G094000.1	Wheat	extracellular	67.24	67.24
TraesCS4A01G397900.1	Wheat	extracellular	67.81	67.23
TraesCS7A01G099900.1	Wheat	extracellular, golgi, plasma membrane	68.09	66.57
KRH23361	Soybean	nucleus	66.95	66.57
TraesCS4A01G398600.1	Wheat	extracellular	66.67	66.29
KRH44252	Soybean	nucleus	68.38	65.75
AT3G16370.1	Thale cress	endoplasmic reticulum, vacuole	66.1	65.72
PGSC0003DMT400006459	Potato	extracellular	66.95	65.46
Bra027168.1-P	Field mustard	extracellular	65.81	65.25
Solyc03g121180.2.1	Tomato	nucleus	66.67	65.18
CDY30167	Canola	extracellular	65.53	64.97
HORVU7Hr1G021580.1	Barley	extracellular	65.24	64.87
CDY56196	Canola	vacuole	66.1	64.8
KRH09971	Soybean	nucleus	62.68	64.33
TraesCS4A01G398700.1	Wheat	extracellular	65.53	64.25
HORVU2Hr1G002340.1	Barley	cytosol, plastid	47.01	63.95
PGSC0003DMT400006461	Potato	extracellular	62.11	60.72
Os03t0683800-01	Rice	plastid	58.12	57.14
TraesCS7A01G100200.1	Wheat	extracellular	54.42	56.51
VIT_09s0002g03150.t01	Wine grape	extracellular	56.7	56.06
Solyc03g121170.2.1	Tomato	nucleus	61.54	51.8
Os06t0149100-01	Rice	cytosol	21.37	45.73
CDX75880	Canola	vacuole	35.33	40.0
Os06t0148600-01	Rice	cytosol, golgi, nucleus, plastid	0.57	0.51

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	EntrezGene:4340128	ProteinID:AAP33477.1	EMBL:AK060175	EMBL:AK109420
ProteinID:BAD68619.1	ProteinID:BAD68792.1	ProteinID:BAF18722.1	ProteinID:BAS96160.1	ProteinID:EEE65086.1	InterPro:GDSL
GO:GO:0003674	GO:GO:0003824	GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514	EnsemblPlantsGene:Os06g0148200
EnsemblPlants:Os06t0148200-01	PFAM:PF00657	PANTHER:PTHR22835	PANTHER:PTHR22835:SF134	UniProt:Q5VP33	InterPro:SGNH_hydro_sf
InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM	UniParc:UPI0000457F1A	RefSeq:XP_015642056.1	SEG:seg

Description

GDSL ESTERASE/LIPASE PROTEIN 74Lipase, GDSL domain containing protein. (Os06t0148200-01);Non-protein coding transcript. (Os06t0148200-02)

Coordinates

chr6:+:2515766..2517632

Molecular Weight (calculated)

37626.7 Da

IEP (calculated)

5.306

GRAVY (calculated)

0.084

Length

351 amino acids

Sequence
(BLAST)

001: MEVKCLLLLA LFLLLGTHGG EAQPLVPAVM TFGDSSVDVG NNDYLKTIIK ANFPPYGRDF KNQVPTGRFC NGKLATDITA ETLGFESYAP AYLSPDASGK
101: NLLIGANFAS AGSGYYDHTA LLYHAIPLSQ QLEYFKEYQS KLAAVAGSSQ AQSIINGSLY IISAGASDFV QNYYINPFLY KTQTADQFSD RLVGIFKNTV
201: AQLYSMGARR IGVTSLPPLG CLPAAITLFG YGSSGCVSRL NSDAQNFNGK MNVTVDSLSK TYSDLKIAVF DIYTPLYDLV TSPQSQGFTE ARRGCCGTGT
301: VETTVLLCNP KSIGTCPNAT TYVFWDAVHP SEAANQVLAD SLLAEGINLV T

Best Arabidopsis Sequence Match ( AT3G16370.1 )
(BLAST)

001: MDRCTSSFLL LTLVSTLSIL QISFAQLVPA IMTFGDSVVD VGNNNYLPTL FRADYPPYGR DFANHKATGR FCNGKLATDI TAETLGFTKY PPAYLSPEAS
101: GKNLLIGANF ASAASGYDDK AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIIKGA ICLLSAGSSD FVQNYYVNPL LYKVYTVDAY GSFLIDNFST
201: FIKQVYAVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVS RLNTDAQNFN KKLNAAASKL QKQYSDLKIV VFDIYSPLYD LVQNPSKSGF TEATKGCCGT
301: GTVETTSLLC NPKSFGTCSN ATQYVFWDSV HPSEAANEIL ATALIGQGFS LLG

Arabidopsis Description

APGGDSL esterase/lipase APG [Source:UniProtKB/Swiss-Prot;Acc:Q9LU14]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.