Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • mitochondrion 2
  • extracellular 4
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • plastid 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G398700.1 Wheat extracellular 77.51 73.18
HORVU7Hr1G021630.2 Barley cytosol, plastid 55.33 69.0
TraesCS4A01G398500.1 Wheat plasma membrane 59.47 56.94
TraesCS7A01G099900.1 Wheat extracellular, golgi, plasma membrane 59.17 55.71
TraesCS4A01G398600.1 Wheat extracellular 57.4 54.96
TraesCS4A01G397900.1 Wheat extracellular 57.4 54.8
Os06t0148200-01 Rice extracellular 56.51 54.42
EER87840 Sorghum extracellular, vacuole 56.21 52.78
TraesCS4A01G397000.1 Wheat extracellular 54.73 52.71
TraesCS7A01G097100.1 Wheat golgi 54.44 52.42
Zm00001d011661_P001 Maize extracellular 53.55 50.7
GSMUA_Achr7P08930_001 Banana endoplasmic reticulum, extracellular 50.59 47.63
GSMUA_Achr2P16800_001 Banana extracellular, vacuole 49.41 46.65
KRH47190 Soybean nucleus 46.45 44.48
VIT_09s0002g03140.t01 Wine grape extracellular 46.15 43.82
AT3G16370.1 Thale cress endoplasmic reticulum, vacuole 45.56 43.63
CDY30167 Canola extracellular 45.56 43.5
KRH23361 Soybean nucleus 45.27 43.34
KRH44252 Soybean nucleus 46.75 43.29
Bra027168.1-P Field mustard extracellular 45.27 43.22
PGSC0003DMT400006461 Potato extracellular 45.86 43.18
Solyc03g121180.2.1 Tomato nucleus 45.56 42.9
CDY56196 Canola vacuole 45.27 42.74
PGSC0003DMT400006459 Potato extracellular 45.27 42.62
TraesCS4A01G285700.1 Wheat endoplasmic reticulum, plasma membrane 43.79 41.93
KRH09971 Soybean nucleus 41.72 41.23
VIT_09s0002g03150.t01 Wine grape extracellular 40.24 38.31
TraesCS4A01G399300.1 Wheat endoplasmic reticulum 40.83 38.12
TraesCS7A01G100600.1 Wheat endoplasmic reticulum, golgi 40.53 37.43
Solyc03g121170.2.1 Tomato nucleus 45.27 36.69
CDX75880 Canola vacuole 23.96 26.13
Protein Annotations
EnsemblPlants:TraesCS7A01G100200.1EnsemblPlantsGene:TraesCS7A01G100200Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likePANTHER:PTHR22835
PANTHER:PTHR22835:SF134PFAM:PF00657SignalP:SignalP-noTMTIGR:cd01837MapMan:35.1:
Description
No Description!
Coordinates
chr7A:+:61569916..61571887
Molecular Weight (calculated)
37318.6 Da
IEP (calculated)
8.115
GRAVY (calculated)
-0.048
Length
338 amino acids
Sequence
(BLAST)
001: MRCLLLLVVF FVAGPWKHPG EARPLVPAVM LFGDSLVDIG NNDYIQTAAK ANFPPYGRDF QDHIATGRFC NGKVLSNFIG EALGFTGSPV AYLIPEASGE
101: NLLSGANFAS AQSGYYDQTA HMYNVVPLSQ QLEHFKEYRH KLVVQVGSNQ AQSIISDSLY IISAGSNDYL FNYYVNPFIY KSQDQFSDLL IGILNNTVAV
201: LYGMGARRIG VFSLPSFGCA PLAVTVFGHG GNDTCVTRLN NDAMRFNRKL STSVDLLSKR YHDLKIAVLD LYTPLYSLVT SPGSQGFTES RTRGEDAVGQ
301: ERWRLRCFSA ILYRSGLVQT QQHTCSGILS TPQKQQTM
Best Arabidopsis Sequence Match ( AT3G16370.1 )
(BLAST)
001: MDRCTSSFLL LTLVSTLSIL QISFAQLVPA IMTFGDSVVD VGNNNYLPTL FRADYPPYGR DFANHKATGR FCNGKLATDI TAETLGFTKY PPAYLSPEAS
101: GKNLLIGANF ASAASGYDDK AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIIKGA ICLLSAGSSD FVQNYYVNPL LYKVYTVDAY GSFLIDNFST
201: FIKQVYAVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVS RLNTDAQNFN KKLNAAASKL QKQYSDLKIV VFDIYSPLYD LVQNPSKSGF TEATKGCCGT
301: GTVETTSLLC NPKSFGTCSN ATQYVFWDSV HPSEAANEIL ATALIGQGFS LLG
Arabidopsis Description
APGGDSL esterase/lipase APG [Source:UniProtKB/Swiss-Prot;Acc:Q9LU14]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.