Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G16370.1 | KRH42483 | AT2G01950.1 | 19000166 |
| AT3G16370.1 | KRH58580 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47190 | Soybean | nucleus | 93.7 | 96.88 |
| KRH23361 | Soybean | nucleus | 80.82 | 83.57 |
| KRH09971 | Soybean | nucleus | 75.34 | 80.41 |
| VIT_09s0002g03140.t01 | Wine grape | extracellular | 77.53 | 79.49 |
| Solyc03g121180.2.1 | Tomato | nucleus | 76.71 | 77.99 |
| PGSC0003DMT400006459 | Potato | extracellular | 75.89 | 77.16 |
| AT3G16370.1 | Thale cress | endoplasmic reticulum, vacuole | 71.23 | 73.65 |
| Bra027168.1-P | Field mustard | extracellular | 70.14 | 72.32 |
| CDY30167 | Canola | extracellular | 70.14 | 72.32 |
| PGSC0003DMT400006461 | Potato | extracellular | 70.96 | 72.14 |
| CDY56196 | Canola | vacuole | 70.14 | 71.51 |
| Os06t0148200-01 | Rice | extracellular | 65.75 | 68.38 |
| GSMUA_Achr7P08930_001 | Banana | endoplasmic reticulum, extracellular | 67.12 | 68.25 |
| GSMUA_Achr2P16800_001 | Banana | extracellular, vacuole | 65.75 | 67.04 |
| EER87840 | Sorghum | extracellular, vacuole | 63.84 | 64.72 |
| TraesCS7D01G093200.1 | Wheat | extracellular | 61.92 | 64.39 |
| Zm00001d011661_P001 | Maize | extracellular | 62.74 | 64.15 |
| TraesCS7A01G097100.1 | Wheat | golgi | 61.64 | 64.1 |
| TraesCS4A01G397000.1 | Wheat | extracellular | 61.64 | 64.1 |
| VIT_09s0002g03150.t01 | Wine grape | extracellular | 61.64 | 63.38 |
| Solyc03g121170.2.1 | Tomato | nucleus | 69.32 | 60.67 |
| KRH30531 | Soybean | extracellular, vacuole | 57.26 | 59.21 |
| KRH26558 | Soybean | endoplasmic reticulum, extracellular, vacuole | 55.34 | 57.71 |
| HORVU7Hr1G021310.7 | Barley | extracellular | 62.19 | 57.61 |
| HORVU7Hr1G021630.2 | Barley | cytosol, plastid | 42.74 | 57.56 |
| KRH25150 | Soybean | extracellular | 46.58 | 55.56 |
| HORVU7Hr1G021460.4 | Barley | extracellular | 52.88 | 54.83 |
| TraesCS7D01G094000.1 | Wheat | extracellular | 51.78 | 53.85 |
| HORVU7Hr1G021580.1 | Barley | extracellular | 52.05 | 53.82 |
| TraesCS4A01G398700.1 | Wheat | extracellular | 52.6 | 53.63 |
| TraesCS4A01G397900.1 | Wheat | extracellular | 51.51 | 53.11 |
| TraesCS7D01G094500.1 | Wheat | extracellular | 51.23 | 52.97 |
| TraesCS4A01G398500.1 | Wheat | plasma membrane | 50.96 | 52.69 |
| EER87852 | Sorghum | extracellular | 52.05 | 52.63 |
| TraesCS7A01G099900.1 | Wheat | extracellular, golgi, plasma membrane | 51.51 | 52.37 |
| HORVU2Hr1G002340.1 | Barley | cytosol, plastid | 36.99 | 52.33 |
| TraesCS4A01G398600.1 | Wheat | extracellular | 50.41 | 52.12 |
| Zm00001d036175_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 50.96 | 51.81 |
| TraesCS4A01G399300.1 | Wheat | endoplasmic reticulum | 50.41 | 50.83 |
| TraesCS7D01G094900.1 | Wheat | endoplasmic reticulum, golgi | 50.14 | 50.55 |
| HORVU7Hr1G021620.2 | Barley | endoplasmic reticulum, golgi, mitochondrion | 50.96 | 50.54 |
| TraesCS7A01G100600.1 | Wheat | endoplasmic reticulum, golgi | 49.86 | 49.73 |
| KRH22747 | Soybean | mitochondrion | 56.99 | 48.94 |
| TraesCS3D01G431500.1 | Wheat | endoplasmic reticulum, golgi | 50.96 | 47.09 |
| TraesCS7A01G100200.1 | Wheat | extracellular | 43.29 | 46.75 |
| Os06t0149100-01 | Rice | cytosol | 19.73 | 43.9 |
| HORVU0Hr1G019420.1 | Barley | endoplasmic reticulum, mitochondrion | 27.12 | 42.67 |
| KRG89977 | Soybean | cytosol | 14.52 | 42.4 |
| CDX75880 | Canola | vacuole | 35.89 | 42.26 |
| KRH61021 | Soybean | mitochondrion | 16.71 | 38.12 |
| KRH05981 | Soybean | extracellular | 36.99 | 36.89 |
| KRH17464 | Soybean | extracellular | 36.99 | 36.78 |
| KRH72762 | Soybean | cytosol | 17.26 | 35.8 |
Protein Annotations
| EntrezGene:100793645 | Gene3D:3.40.50.1110 | MapMan:35.1 | EMBL:ACUP02004923 | InterPro:GDSL | EnsemblPlantsGene:GLYMA_08G199500 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 | GO:GO:0016788 | UniProt:I1KV03 | InterPro:IPR036514 |
| EnsemblPlants:KRH44252 | ProteinID:KRH44252 | ProteinID:KRH44252.1 | PFAM:PF00657 | PFscan:PS51257 | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF170 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | TMHMM:TMhelix | UniParc:UPI00023C5E28 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:16119535..16122025
Molecular Weight (calculated)
39393.0 Da
IEP (calculated)
8.654
GRAVY (calculated)
0.031
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MHIQRNKNII KMINIIGALV LLFAFLFLSC VYAQDTTTLV PAIITFGDSA VDVGNNDYLP TLFKADYPPY GRDFVNHQPT GRFCNGKLAT DFTADTLGFK
101: TYAPAYLSPH ASGKNLLIGA NFASAASGYD ENAATLNHAI PLSQQLSYFK EYQGKLAKVA GSKKAASIIK DALYVLSAGS SDFVQNYYVN PWINKVYTPD
201: QYSSYLIGSF SSFVKDLYGL GGRRLGVTSL PPLGCLPAAR TIFGFHENGC VSRINTDAQG FNKKLNSAAT SLQKQLPGLK IAVFDIYKPL YDLVQSPSKS
301: GFVEANRGCC GTGTVETTSL LCNPKSPGTC SNATQYVFWD SVHPSQAANQ VLADALILQG ISLVT
101: TYAPAYLSPH ASGKNLLIGA NFASAASGYD ENAATLNHAI PLSQQLSYFK EYQGKLAKVA GSKKAASIIK DALYVLSAGS SDFVQNYYVN PWINKVYTPD
201: QYSSYLIGSF SSFVKDLYGL GGRRLGVTSL PPLGCLPAAR TIFGFHENGC VSRINTDAQG FNKKLNSAAT SLQKQLPGLK IAVFDIYKPL YDLVQSPSKS
301: GFVEANRGCC GTGTVETTSL LCNPKSPGTC SNATQYVFWD SVHPSQAANQ VLADALILQG ISLVT
001: MDRCTSSFLL LTLVSTLSIL QISFAQLVPA IMTFGDSVVD VGNNNYLPTL FRADYPPYGR DFANHKATGR FCNGKLATDI TAETLGFTKY PPAYLSPEAS
101: GKNLLIGANF ASAASGYDDK AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIIKGA ICLLSAGSSD FVQNYYVNPL LYKVYTVDAY GSFLIDNFST
201: FIKQVYAVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVS RLNTDAQNFN KKLNAAASKL QKQYSDLKIV VFDIYSPLYD LVQNPSKSGF TEATKGCCGT
301: GTVETTSLLC NPKSFGTCSN ATQYVFWDSV HPSEAANEIL ATALIGQGFS LLG
101: GKNLLIGANF ASAASGYDDK AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIIKGA ICLLSAGSSD FVQNYYVNPL LYKVYTVDAY GSFLIDNFST
201: FIKQVYAVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVS RLNTDAQNFN KKLNAAASKL QKQYSDLKIV VFDIYSPLYD LVQNPSKSGF TEATKGCCGT
301: GTVETTSLLC NPKSFGTCSN ATQYVFWDSV HPSEAANEIL ATALIGQGFS LLG
Arabidopsis Description
APGGDSL esterase/lipase APG [Source:UniProtKB/Swiss-Prot;Acc:Q9LU14]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.