Factsheet for TraesCS7D01G094000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 1
extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G16370.1	TraesCS3A01G099400.1	AT2G01950.1	19000166
AT3G16370.1	TraesCS3B01G115800.1	AT2G01950.1	19000166
AT3G16370.1	TraesCS3D01G099700.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G397900.1	Wheat	extracellular	95.16	94.35
HORVU7Hr1G021460.4	Barley	extracellular	85.19	84.94
Os06t0148200-01	Rice	extracellular	67.24	67.24
TraesCS7D01G094500.1	Wheat	extracellular	66.95	66.57
EER87840	Sorghum	extracellular, vacuole	64.96	63.33
TraesCS7D01G093200.1	Wheat	extracellular	62.68	62.68
Zm00001d011661_P001	Maize	extracellular	62.68	61.62
GSMUA_Achr7P08930_001	Banana	endoplasmic reticulum, extracellular	58.12	56.82
GSMUA_Achr2P16800_001	Banana	extracellular, vacuole	57.27	56.15
VIT_09s0002g03140.t01	Wine grape	extracellular	55.27	54.49
AT3G16370.1	Thale cress	endoplasmic reticulum, vacuole	53.85	53.54
KRH47190	Soybean	nucleus	53.85	53.54
KRH23361	Soybean	nucleus	53.28	52.97
Bra027168.1-P	Field mustard	extracellular	53.28	52.82
CDY30167	Canola	extracellular	53.28	52.82
CDY56196	Canola	vacuole	53.56	52.51
PGSC0003DMT400006459	Potato	extracellular	53.28	52.09
Solyc03g121180.2.1	Tomato	nucleus	53.28	52.09
KRH44252	Soybean	nucleus	53.85	51.78
KRH09971	Soybean	nucleus	49.86	51.17
TraesCS4D01G024900.1	Wheat	endoplasmic reticulum, plasma membrane	51.28	49.72
PGSC0003DMT400006461	Potato	extracellular	49.86	48.75
TraesCS7D01G094900.1	Wheat	endoplasmic reticulum, golgi	47.86	46.41
VIT_09s0002g03150.t01	Wine grape	extracellular	46.72	46.2
TraesCS3D01G431500.1	Wheat	endoplasmic reticulum, golgi	47.86	42.53
Solyc03g121170.2.1	Tomato	nucleus	50.14	42.21
TraesCS7D01G346800.1	Wheat	cytosol, extracellular, mitochondrion	13.96	35.0
CDX75880	Canola	vacuole	29.91	33.87

Protein Annotations

EnsemblPlants:TraesCS7D01G094000.1	EnsemblPlantsGene:TraesCS7D01G094000	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835
PANTHER:PTHR22835:SF134	PFAM:PF00657	SignalP:SignalP-noTM	SUPFAM:SSF52266	TIGR:cd01837	MapMan:35.1

Description

No Description!

Coordinates

chr7D:+:56402440..56403971

Molecular Weight (calculated)

38039.5 Da

IEP (calculated)

7.036

GRAVY (calculated)

0.103

Length

351 amino acids

Sequence
(BLAST)

001: MSSRCLLLLA IFLSTQPTGQ SGEEGPAVPA LMVFGDSLVD VGNNNYIFTI AKANFPPYGR DFKDHVATGR FCNGKLLIDF IAEKVGFNGS PLAYLSPEAS
101: GQNLLLGANF ASAASGYNDH GTLIKAISVS QQLKYFKDYQ AKLAVVAGSS HARSIISGSL YIICAGSCDF VYNYYINPFL DTNQTAEQFS DRLVGMFNNS
201: VTQLYEMGAR RIGVFSLPPF GCFPMAITLY GHGRSGCVSR LNNDAQYYNM KLKAAVDSLS KKYHDLKIVV LDMYAPLYNL ATSPVSQGFT EAKRACCGTG
301: TVEASILCNS LLPGTCPSAR TYVFWDVWHP SEAANKVVVD SLVDEINNLV A

Best Arabidopsis Sequence Match ( AT3G16370.1 )
(BLAST)

001: MDRCTSSFLL LTLVSTLSIL QISFAQLVPA IMTFGDSVVD VGNNNYLPTL FRADYPPYGR DFANHKATGR FCNGKLATDI TAETLGFTKY PPAYLSPEAS
101: GKNLLIGANF ASAASGYDDK AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIIKGA ICLLSAGSSD FVQNYYVNPL LYKVYTVDAY GSFLIDNFST
201: FIKQVYAVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVS RLNTDAQNFN KKLNAAASKL QKQYSDLKIV VFDIYSPLYD LVQNPSKSGF TEATKGCCGT
301: GTVETTSLLC NPKSFGTCSN ATQYVFWDSV HPSEAANEIL ATALIGQGFS LLG

Arabidopsis Description

APGGDSL esterase/lipase APG [Source:UniProtKB/Swiss-Prot;Acc:Q9LU14]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.