Factsheet for Bra027168.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G16370.1	Bra024839.1-P	AT2G01950.1	19000166
AT3G16370.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56196	Canola	vacuole	100.0	98.88
AT3G16370.1	Thale cress	endoplasmic reticulum, vacuole	88.42	88.67
KRH23361	Soybean	nucleus	72.03	72.24
KRH47190	Soybean	nucleus	71.47	71.67
KRH44252	Soybean	nucleus	72.32	70.14
KRH09971	Soybean	nucleus	67.23	69.59
VIT_09s0002g03140.t01	Wine grape	extracellular	69.77	69.38
Solyc03g121180.2.1	Tomato	nucleus	69.21	68.25
PGSC0003DMT400006459	Potato	extracellular	68.93	67.97
Os06t0148200-01	Rice	extracellular	65.25	65.81
PGSC0003DMT400006461	Potato	extracellular	63.84	62.95
GSMUA_Achr7P08930_001	Banana	endoplasmic reticulum, extracellular	63.56	62.67
GSMUA_Achr2P16800_001	Banana	extracellular, vacuole	63.28	62.57
TraesCS7D01G093200.1	Wheat	extracellular	61.86	62.39
TraesCS4A01G397000.1	Wheat	extracellular	61.86	62.39
EER87840	Sorghum	extracellular, vacuole	62.99	61.94
TraesCS7A01G097100.1	Wheat	golgi	61.3	61.82
Zm00001d011661_P001	Maize	extracellular	61.58	61.06
VIT_09s0002g03150.t01	Wine grape	extracellular	59.04	58.87
Bra005782.1-P	Field mustard	extracellular, plasma membrane	57.06	57.22
Bra005781.1-P	Field mustard	plastid	33.33	56.46
HORVU7Hr1G021630.2	Barley	cytosol, plastid	42.66	55.72
HORVU7Hr1G021310.7	Barley	extracellular	61.86	55.58
Bra028818.1-P	Field mustard	extracellular, plasma membrane	54.8	55.43
Bra020216.1-P	Field mustard	extracellular	56.21	55.28
Solyc03g121170.2.1	Tomato	nucleus	63.84	54.2
TraesCS7D01G094000.1	Wheat	extracellular	52.82	53.28
HORVU7Hr1G021460.4	Barley	extracellular	52.82	53.12
TraesCS4A01G397900.1	Wheat	extracellular	52.82	52.82
TraesCS7D01G094500.1	Wheat	extracellular	52.26	52.41
TraesCS4A01G398600.1	Wheat	extracellular	51.98	52.12
HORVU2Hr1G002340.1	Barley	cytosol, plastid	37.85	51.94
TraesCS7A01G099900.1	Wheat	extracellular, golgi, plasma membrane	52.54	51.81
TraesCS4A01G398500.1	Wheat	plasma membrane	51.41	51.56
HORVU7Hr1G021580.1	Barley	extracellular	51.41	51.56
Bra040686.1-P	Field mustard	extracellular, plasma membrane	50.85	51.28
TraesCS4A01G398700.1	Wheat	extracellular	51.69	51.12
Zm00001d036175_P001	Maize	endoplasmic reticulum, extracellular, vacuole	51.69	50.97
EER87852	Sorghum	extracellular	51.69	50.69
TraesCS4A01G399300.1	Wheat	endoplasmic reticulum	51.13	50.0
HORVU7Hr1G021620.2	Barley	endoplasmic reticulum, golgi, mitochondrion	51.41	49.46
TraesCS7D01G094900.1	Wheat	endoplasmic reticulum, golgi	50.56	49.45
TraesCS7A01G100600.1	Wheat	endoplasmic reticulum, golgi	50.85	49.18
TraesCS3D01G431500.1	Wheat	endoplasmic reticulum, golgi	51.41	46.08
TraesCS7A01G100200.1	Wheat	extracellular	43.22	45.27
Os06t0149100-01	Rice	cytosol	19.77	42.68
HORVU0Hr1G019420.1	Barley	endoplasmic reticulum, mitochondrion	27.68	42.24
Bra024605.1-P	Field mustard	extracellular	33.62	35.31
Bra012377.1-P	Field mustard	extracellular	33.33	34.6
Bra029234.1-P	Field mustard	plasma membrane	32.77	34.32
Bra008229.1-P	Field mustard	extracellular, plasma membrane	32.77	34.02
Bra014533.1-P	Field mustard	cytosol, mitochondrion	18.64	33.17

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	EnsemblPlantsGene:Bra027168	EnsemblPlants:Bra027168.1	EnsemblPlants:Bra027168.1-P	ncoils:Coil
InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005576	GO:GO:0016787
GO:GO:0016788	GO:GO:0048046	InterPro:IPR036514	UniProt:M4EEF6	PFAM:PF00657	PANTHER:PTHR22835
PANTHER:PTHR22835:SF134	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM	UniParc:UPI000254782E
SEG:seg	:	:	:	:	:

Description

AT3G16370 (E=2e-179) | GDSL-motif lipase/hydrolase family protein

Coordinates

chrA05:-:19474411..19475818

Molecular Weight (calculated)

38293.7 Da

IEP (calculated)

8.336

GRAVY (calculated)

-0.005

Length

354 amino acids

Sequence
(BLAST)

001: MTSCLLLLLV STYSVLQISF AQDAPTSLFP GMIIFGDSVV DVGNNNYLPT LFRADYPPYG RDFAGHKPTG RFCNGKLATD ITAETLGFTK YPPAYLSPEA
101: SGKNLLIGAN FASAASGYDD KAALLNHAIP LYQQVEYYKE YKSKLIKVAG SKQADTIIKG SIYLLSAGSS DFVQNYYVNP LVNKFYTADQ YGSMLIDNFS
201: TFIKQVYAVG ARKIGVTSLP PTGCLPAART LFGYHEKGCV SRLNTDAQQF NKKLNAAASK LQKQYSGLKI VVFDIFTPLY DLVQSPAKSG FTEATKGCCG
301: TGTVETTSLL CNPKSYGTCT NATQYVFWDS VHPSEAANEI LATSLIGQGF SLIG

Best Arabidopsis Sequence Match ( AT3G16370.1 )
(BLAST)

001: MDRCTSSFLL LTLVSTLSIL QISFAQLVPA IMTFGDSVVD VGNNNYLPTL FRADYPPYGR DFANHKATGR FCNGKLATDI TAETLGFTKY PPAYLSPEAS
101: GKNLLIGANF ASAASGYDDK AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIIKGA ICLLSAGSSD FVQNYYVNPL LYKVYTVDAY GSFLIDNFST
201: FIKQVYAVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVS RLNTDAQNFN KKLNAAASKL QKQYSDLKIV VFDIYSPLYD LVQNPSKSGF TEATKGCCGT
301: GTVETTSLLC NPKSFGTCSN ATQYVFWDSV HPSEAANEIL ATALIGQGFS LLG

Arabidopsis Description

APGGDSL esterase/lipase APG [Source:UniProtKB/Swiss-Prot;Acc:Q9LU14]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.