Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 5
- vacuole 5
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30167 | Canola | extracellular | 88.95 | 88.7 |
| Bra027168.1-P | Field mustard | extracellular | 88.67 | 88.42 |
| CDY56196 | Canola | vacuole | 89.24 | 87.99 |
| KRH47190 | Soybean | nucleus | 72.8 | 72.8 |
| KRH23361 | Soybean | nucleus | 71.95 | 71.95 |
| KRH44252 | Soybean | nucleus | 73.65 | 71.23 |
| VIT_09s0002g03140.t01 | Wine grape | extracellular | 70.82 | 70.22 |
| KRH09971 | Soybean | nucleus | 67.71 | 69.88 |
| Solyc03g121180.2.1 | Tomato | nucleus | 69.12 | 67.97 |
| PGSC0003DMT400006459 | Potato | extracellular | 68.84 | 67.69 |
| Os06t0148200-01 | Rice | extracellular | 65.72 | 66.1 |
| GSMUA_Achr7P08930_001 | Banana | endoplasmic reticulum, extracellular | 65.72 | 64.62 |
| EER87840 | Sorghum | extracellular, vacuole | 64.87 | 63.61 |
| TraesCS4A01G397000.1 | Wheat | extracellular | 63.17 | 63.53 |
| TraesCS7D01G093200.1 | Wheat | extracellular | 63.17 | 63.53 |
| GSMUA_Achr2P16800_001 | Banana | extracellular, vacuole | 64.31 | 63.41 |
| TraesCS7A01G097100.1 | Wheat | golgi | 62.89 | 63.25 |
| PGSC0003DMT400006461 | Potato | extracellular | 64.02 | 62.95 |
| Zm00001d011661_P001 | Maize | extracellular | 63.46 | 62.75 |
| HORVU7Hr1G021310.7 | Barley | extracellular | 63.46 | 56.85 |
| VIT_09s0002g03150.t01 | Wine grape | extracellular | 56.94 | 56.62 |
| AT5G22810.1 | Thale cress | extracellular | 56.94 | 55.99 |
| HORVU7Hr1G021630.2 | Barley | cytosol, plastid | 42.21 | 54.98 |
| Solyc03g121170.2.1 | Tomato | nucleus | 64.59 | 54.68 |
| AT5G03810.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 54.67 | 54.67 |
| TraesCS7D01G094000.1 | Wheat | extracellular | 53.54 | 53.85 |
| HORVU7Hr1G021460.4 | Barley | extracellular | 53.54 | 53.69 |
| TraesCS4A01G397900.1 | Wheat | extracellular | 53.26 | 53.11 |
| TraesCS4A01G398600.1 | Wheat | extracellular | 52.97 | 52.97 |
| HORVU7Hr1G021580.1 | Barley | extracellular | 52.69 | 52.69 |
| TraesCS7D01G094500.1 | Wheat | extracellular | 52.41 | 52.41 |
| CDX75880 | Canola | vacuole | 45.33 | 51.61 |
| AT5G03820.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 56.09 | 51.43 |
| TraesCS4A01G398700.1 | Wheat | extracellular | 52.12 | 51.4 |
| TraesCS4A01G398500.1 | Wheat | plasma membrane | 51.27 | 51.27 |
| TraesCS7A01G099900.1 | Wheat | extracellular, golgi, plasma membrane | 52.12 | 51.25 |
| EER87852 | Sorghum | extracellular | 52.41 | 51.25 |
| Zm00001d036175_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 51.84 | 50.97 |
| HORVU2Hr1G002340.1 | Barley | cytosol, plastid | 37.11 | 50.78 |
| AT3G53100.1 | Thale cress | extracellular | 50.42 | 50.71 |
| TraesCS4A01G399300.1 | Wheat | endoplasmic reticulum | 50.71 | 49.45 |
| HORVU7Hr1G021620.2 | Barley | endoplasmic reticulum, golgi, mitochondrion | 50.99 | 48.91 |
| TraesCS7D01G094900.1 | Wheat | endoplasmic reticulum, golgi | 50.14 | 48.9 |
| TraesCS7A01G100600.1 | Wheat | endoplasmic reticulum, golgi | 50.42 | 48.63 |
| TraesCS3D01G431500.1 | Wheat | endoplasmic reticulum, golgi | 50.99 | 45.57 |
| TraesCS7A01G100200.1 | Wheat | extracellular | 43.63 | 45.56 |
| Os06t0149100-01 | Rice | cytosol | 19.83 | 42.68 |
| HORVU0Hr1G019420.1 | Barley | endoplasmic reticulum, mitochondrion | 27.48 | 41.81 |
| AT5G63170.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 36.26 | 37.87 |
| AT1G23500.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 36.54 | 37.39 |
| AT1G20135.1 | Thale cress | extracellular, plasma membrane | 32.58 | 35.06 |
| AT1G75930.1 | Thale cress | extracellular, plasma membrane | 33.99 | 34.99 |
| AT2G31550.1 | Thale cress | cytosol | 21.53 | 34.7 |
| AT1G75910.1 | Thale cress | endoplasmic reticulum, plasma membrane | 33.71 | 34.69 |
| AT1G73610.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 33.71 | 34.59 |
| AT1G75920.1 | Thale cress | plasma membrane | 34.28 | 34.28 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | EntrezGene:820884 | UniProt:A0A178V9X5 | ProteinID:AAB63641.1 | ProteinID:AEE75804.1 |
| ArrayExpress:AT3G16370 | EnsemblPlantsGene:AT3G16370 | RefSeq:AT3G16370 | TAIR:AT3G16370 | RefSeq:AT3G16370-TAIR-G | EnsemblPlants:AT3G16370.1 |
| TAIR:AT3G16370.1 | EMBL:AY075698 | ProteinID:BAB01276.1 | EMBL:BT002609 | ncoils:Coil | InterPro:GDSL |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016787 | GO:GO:0016788 | GO:GO:0048046 |
| InterPro:IPR036514 | RefSeq:NP_188258.1 | ProteinID:OAP02929.1 | PFAM:PF00657 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF134 | UniProt:Q9LU14 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0000048721 | EMBL:Z26539 | SEG:seg | : | : |
Description
APGGDSL esterase/lipase APG [Source:UniProtKB/Swiss-Prot;Acc:Q9LU14]
Coordinates
chr3:+:5556710..5558982
Molecular Weight (calculated)
38201.6 Da
IEP (calculated)
8.431
GRAVY (calculated)
0.046
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRCTSSFLL LTLVSTLSIL QISFAQLVPA IMTFGDSVVD VGNNNYLPTL FRADYPPYGR DFANHKATGR FCNGKLATDI TAETLGFTKY PPAYLSPEAS
101: GKNLLIGANF ASAASGYDDK AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIIKGA ICLLSAGSSD FVQNYYVNPL LYKVYTVDAY GSFLIDNFST
201: FIKQVYAVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVS RLNTDAQNFN KKLNAAASKL QKQYSDLKIV VFDIYSPLYD LVQNPSKSGF TEATKGCCGT
301: GTVETTSLLC NPKSFGTCSN ATQYVFWDSV HPSEAANEIL ATALIGQGFS LLG
101: GKNLLIGANF ASAASGYDDK AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIIKGA ICLLSAGSSD FVQNYYVNPL LYKVYTVDAY GSFLIDNFST
201: FIKQVYAVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVS RLNTDAQNFN KKLNAAASKL QKQYSDLKIV VFDIYSPLYD LVQNPSKSGF TEATKGCCGT
301: GTVETTSLLC NPKSFGTCSN ATQYVFWDSV HPSEAANEIL ATALIGQGFS LLG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.