Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 6
- plastid 1
- vacuole 4
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72994 | Canola | extracellular | 78.49 | 79.65 |
| CDX96486 | Canola | extracellular, plasma membrane | 77.62 | 78.76 |
| AT1G23500.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 68.6 | 68.41 |
| AT5G63170.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 56.98 | 57.99 |
| AT1G20135.1 | Thale cress | extracellular, plasma membrane | 51.16 | 53.66 |
| AT1G75910.1 | Thale cress | endoplasmic reticulum, plasma membrane | 47.97 | 48.1 |
| AT1G75930.1 | Thale cress | extracellular, plasma membrane | 45.64 | 45.77 |
| AT1G75920.1 | Thale cress | plasma membrane | 45.35 | 44.19 |
| KRH05981 | Soybean | extracellular | 45.64 | 42.9 |
| KRH17464 | Soybean | extracellular | 44.48 | 41.69 |
| VIT_09s0002g03050.t01 | Wine grape | extracellular | 11.05 | 36.19 |
| AT5G03810.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 35.47 | 34.56 |
| AT3G16370.1 | Thale cress | endoplasmic reticulum, vacuole | 34.59 | 33.71 |
| AT3G53100.1 | Thale cress | extracellular | 33.72 | 33.05 |
| AT5G03820.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 35.47 | 31.69 |
| TraesCS7D01G346800.1 | Wheat | cytosol, extracellular, mitochondrion | 12.79 | 31.43 |
| AT5G22810.1 | Thale cress | extracellular | 31.98 | 30.64 |
| AT2G31550.1 | Thale cress | cytosol | 19.19 | 30.14 |
| Zm00001d024117_P001 | Maize | cytosol, mitochondrion | 9.88 | 24.82 |
| Zm00001d044521_P001 | Maize | cytosol, mitochondrion | 9.88 | 24.82 |
| HORVU1Hr1G065930.2 | Barley | mitochondrion | 20.06 | 17.34 |
| Os06t0148600-01 | Rice | cytosol, golgi, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | EntrezGene:843695 | ProteinID:AAG52082.1 | ProteinID:AEE35485.1 | ArrayExpress:AT1G73610 |
| EnsemblPlantsGene:AT1G73610 | RefSeq:AT1G73610 | TAIR:AT1G73610 | RefSeq:AT1G73610-TAIR-G | EnsemblPlants:AT1G73610.1 | TAIR:AT1G73610.1 |
| InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016298 | GO:GO:0016787 |
| GO:GO:0016788 | InterPro:IPR036514 | InterPro:Lipase_GDSL_AS | RefSeq:NP_177502.1 | PFAM:PF00657 | PO:PO:0000084 |
| PO:PO:0001185 | PO:PO:0009009 | PO:PO:0020090 | ScanProsite:PS01098 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF330 |
| UniProt:Q9C9V0 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | SignalP:SignalP-noTM | UniParc:UPI000004846D |
| SEG:seg | : | : | : | : | : |
Description
GDSL esterase/lipase At1g73610 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9V0]
Coordinates
chr1:+:27678313..27680060
Molecular Weight (calculated)
37504.9 Da
IEP (calculated)
5.801
GRAVY (calculated)
0.156
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MNCLMFFKML LAFSFISLFY VGNAQQSYGN STVSALFAFG DSILDTGNNN LLLSVSKVNF YPYGRDFIGG RATGRFGNGR VFSDIIAEGL GLKNLLPAYR
101: DPYLWNNDLT TGVCFASGGS GLDPITARTT GSIWVSDQVT DFQNYITRLN GVVGNQEQAN AVISNAVYLI SAGNNDIAIT YFTTGARRLQ YTLPAYNDQL
201: VSWTRDLIKS LYDMGARKFA VMGTLPLGCL PGARALTRAC ELFVNQGAAM FNQQLSADID NLGATFPGAK FVYVDMYNPL LGLIINPQAS GFIDVADACC
301: CTPTHLIPCL DASRYVFWDV AHPTQKSYET IAPQIIENIK AKLA
101: DPYLWNNDLT TGVCFASGGS GLDPITARTT GSIWVSDQVT DFQNYITRLN GVVGNQEQAN AVISNAVYLI SAGNNDIAIT YFTTGARRLQ YTLPAYNDQL
201: VSWTRDLIKS LYDMGARKFA VMGTLPLGCL PGARALTRAC ELFVNQGAAM FNQQLSADID NLGATFPGAK FVYVDMYNPL LGLIINPQAS GFIDVADACC
301: CTPTHLIPCL DASRYVFWDV AHPTQKSYET IAPQIIENIK AKLA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.