Factsheet for AT1G20135.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 6
vacuole 4
plasma membrane 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43409	Canola	extracellular, plasma membrane	76.83	74.12
AT5G63170.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	56.71	55.03
CDY57589	Canola	plasma membrane	76.52	53.75
AT1G23500.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	55.49	52.75
AT1G73610.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	53.66	51.16
AT1G75910.1	Thale cress	endoplasmic reticulum, plasma membrane	48.78	46.65
AT1G75920.1	Thale cress	plasma membrane	48.78	45.33
AT1G75930.1	Thale cress	extracellular, plasma membrane	44.51	42.57
KRH17464	Soybean	extracellular	42.99	38.42
KRH05981	Soybean	extracellular	42.07	37.7
AT3G16370.1	Thale cress	endoplasmic reticulum, vacuole	35.06	32.58
VIT_09s0002g03050.t01	Wine grape	extracellular	10.37	32.38
AT2G31550.1	Thale cress	cytosol	21.34	31.96
AT5G03810.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	33.84	31.44
TraesCS7D01G346800.1	Wheat	cytosol, extracellular, mitochondrion	12.5	29.29
AT3G53100.1	Thale cress	extracellular	31.1	29.06
AT5G22810.1	Thale cress	extracellular	31.4	28.69
AT5G03820.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	33.54	28.57
Zm00001d024117_P001	Maize	cytosol, mitochondrion	10.37	24.82
Zm00001d044521_P001	Maize	cytosol, mitochondrion	10.06	24.09
HORVU1Hr1G065930.2	Barley	mitochondrion	19.82	16.33
Os06t0148600-01	Rice	cytosol, golgi, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	EntrezGene:6241329	ProteinID:AEE29942.1	ArrayExpress:AT1G20135	EnsemblPlantsGene:AT1G20135
RefSeq:AT1G20135	TAIR:AT1G20135	RefSeq:AT1G20135-TAIR-G	EnsemblPlants:AT1G20135.1	TAIR:AT1G20135.1	UniProt:B3H5G5
InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0016298	GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514	InterPro:Lipase_GDSL_AS	RefSeq:NP_001117318.4
PFAM:PF00657	PO:PO:0007611	PO:PO:0007616	PO:PO:0009029	PO:PO:0009030	PO:PO:0009032
PO:PO:0009046	PO:PO:0025022	ScanProsite:PS01098	PFscan:PS51257	PANTHER:PTHR22835	PANTHER:PTHR22835:SF330
InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM	UniParc:UPI0001A7B202	:

Description

GDSL-like Lipase/Acylhydrolase family protein [Source:UniProtKB/TrEMBL;Acc:B3H5G5]

Coordinates

chr1:+:6984042..6985703

Molecular Weight (calculated)

35948.4 Da

IEP (calculated)

9.003

GRAVY (calculated)

0.080

Length

328 amino acids

Sequence
(BLAST)

001: MENANIKVLV VLLSIWISCV QAQTGTFSAV LAFGDSILDT GNNNLLMTVS RGNFLPYGRD FPHRIPTGRF GNGRVLSDLV ASGLGVKDLL PAFRSPFLKN
101: SELATGVCFA SGGSGLDKFT ASIQGVIWVQ DQVSDFQRYL EKLNQQVGDA AKVKEIIANA VILVSAGNND LAITYFSTPK RQTRYTVQAY TDMLIGWKTT
201: FINSLYDLGA RKFAILGTLP LGCLPGARQI TGNLICLPNV NYGARVYNDK VANLVNQYNQ RLPNGKFVYI DMYNSLLEVI NNPSQYGFTT AKPCCCSVMT
301: PIPCLRSGSH VFWDFAHPSE KAYKTVLP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.