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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, endoplasmic reticulum

Predictor Summary:
  • extracellular 4
  • golgi 4
  • endoplasmic reticulum 5
  • plastid 2
  • plasma membrane 4
  • vacuole 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45771 Canola extracellular, plasma membrane 75.8 76.25
Bra014533.1-P Field mustard cytosol, mitochondrion 44.02 75.88
CDY67584 Canola extracellular, plasma membrane 73.18 73.61
CDY39069 Canola extracellular, plasma membrane 73.18 73.61
CDY13524 Canola extracellular, plasma membrane 73.18 73.61
Bra008229.1-P Field mustard extracellular, plasma membrane 72.89 73.31
CDX89030 Canola plasma membrane 63.56 72.67
AT1G75920.1 Thale cress plasma membrane 71.14 69.12
AT1G75930.1 Thale cress extracellular, plasma membrane 57.14 57.14
AT5G63170.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 48.1 48.82
AT1G20135.1 Thale cress extracellular, plasma membrane 46.65 48.78
AT1G73610.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 48.1 47.97
AT1G23500.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 47.81 47.54
KRH05981 Soybean extracellular 40.52 37.98
KRH17464 Soybean extracellular 39.36 36.78
VIT_09s0002g03050.t01 Wine grape extracellular 10.79 35.24
AT3G16370.1 Thale cress endoplasmic reticulum, vacuole 34.69 33.71
AT5G03810.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 33.82 32.86
AT2G31550.1 Thale cress cytosol 19.53 30.59
AT5G03820.2 Thale cress endoplasmic reticulum, extracellular, plasma membrane 34.11 30.39
TraesCS7D01G346800.1 Wheat cytosol, extracellular, mitochondrion 12.24 30.0
AT3G53100.1 Thale cress extracellular 29.74 29.06
AT5G22810.1 Thale cress extracellular 30.32 28.97
Zm00001d024117_P001 Maize cytosol, mitochondrion 10.79 27.01
Zm00001d044521_P001 Maize cytosol, mitochondrion 10.79 27.01
HORVU1Hr1G065930.2 Barley mitochondrion 19.24 16.58
Os06t0148600-01 Rice cytosol, golgi, nucleus, plastid 0.0 0.0
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1EntrezGene:843924UniProt:A0A178WJM0ProteinID:AAF79815.1ProteinID:AEE35773.1
EMBL:AK227028ArrayExpress:AT1G75910EnsemblPlantsGene:AT1G75910RefSeq:AT1G75910TAIR:AT1G75910RefSeq:AT1G75910-TAIR-G
EnsemblPlants:AT1G75910.1TAIR:AT1G75910.1EMBL:AY028612Unigene:At.25298Symbol:EXL4InterPro:GDSL
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005576GO:GO:0005578GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0016042GO:GO:0016298GO:GO:0016787
GO:GO:0016788GO:GO:0031012GO:GO:0070505InterPro:IPR036514InterPro:Lipase_GDSL_ASRefSeq:NP_177719.1
ProteinID:OAP17312.1PFAM:PF00657PO:PO:0007611PO:PO:0007616PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0025022ScanProsite:PS01098PANTHER:PTHR22835PANTHER:PTHR22835:SF330UniProt:Q0WUV7
InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeSUPFAM:SSF52266SignalP:SignalP-noTMUniParc:UPI00001632C7:
Description
EXL4GDSL esterase/lipase EXL4 [Source:UniProtKB/Swiss-Prot;Acc:Q0WUV7]
Coordinates
chr1:+:28501434..28503283
Molecular Weight (calculated)
37913.1 Da
IEP (calculated)
10.303
GRAVY (calculated)
-0.049
Length
343 amino acids
Sequence
(BLAST)
001: MCSKITLVLT LFSSYFISTD AVNGSFPALL AFGDSILDTG NNNFLLTFMK GNIWPYGRSF SMRRATGRFG NGRVFSDIVA EGLGIKKILP AYRKLFNSPS
101: DLRTGVCFAS GGAGVDPVTS KLLRVLTPKD QVNDFKGYIR KLKATAGPSR ASSIVSNAVI LVSQGNNDIG ISYFGTPTAA FRGLTPNRYT TKLAGWNKQF
201: MKELYDQGAR KFAVMGVIPL GCLPMTRIFL GGFVITCNFF ANRVAEQYNG KLRSGTKSWG REAGFRGAKF VYVDMYNTLM DVIKNYRRYG FSNEKNGCCC
301: MITAIIPCPN PDKYVFYDFV HPSEKAYRTI SKKLVQDIKN GLA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.