Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45771 | Canola | extracellular, plasma membrane | 92.67 | 81.52 |
| Bra014533.1-P | Field mustard | cytosol, mitochondrion | 49.33 | 74.37 |
| CDY67584 | Canola | extracellular, plasma membrane | 83.33 | 73.31 |
| CDY39069 | Canola | extracellular, plasma membrane | 83.33 | 73.31 |
| CDY13524 | Canola | extracellular, plasma membrane | 83.33 | 73.31 |
| AT1G75910.1 | Thale cress | endoplasmic reticulum, plasma membrane | 72.67 | 63.56 |
| AT1G75920.1 | Thale cress | plasma membrane | 63.33 | 53.82 |
| CDY67583 | Canola | extracellular | 52.67 | 46.06 |
| CDY43409 | Canola | extracellular, plasma membrane | 46.33 | 40.88 |
| CDX72994 | Canola | extracellular | 45.33 | 40.12 |
| CDX96486 | Canola | extracellular, plasma membrane | 44.33 | 39.23 |
| CDY45740 | Canola | plasma membrane | 42.0 | 37.28 |
| CDY30744 | Canola | extracellular | 42.0 | 37.28 |
| CDY25788 | Canola | extracellular | 41.33 | 36.36 |
| CDY44153 | Canola | cytosol | 42.33 | 36.08 |
| CDY04705 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 42.67 | 36.06 |
| CDY13523 | Canola | golgi, plasma membrane, plastid | 40.33 | 34.87 |
| CDY54289 | Canola | extracellular | 39.0 | 34.01 |
| KRH05981 | Soybean | extracellular | 37.33 | 30.6 |
| CDY39070 | Canola | extracellular | 15.0 | 30.41 |
| KRH17464 | Soybean | extracellular | 37.0 | 30.25 |
| CDY57589 | Canola | plasma membrane | 47.0 | 30.19 |
| VIT_09s0002g03050.t01 | Wine grape | extracellular | 10.0 | 28.57 |
| CDY30167 | Canola | extracellular | 32.33 | 27.4 |
| CDY56196 | Canola | vacuole | 32.33 | 27.09 |
| CDY15394 | Canola | extracellular | 11.0 | 27.05 |
| CDY14175 | Canola | extracellular, plasma membrane | 27.67 | 25.38 |
| CDY04898 | Canola | extracellular, plasma membrane | 29.0 | 24.86 |
| CDX80889 | Canola | extracellular, plasma membrane | 29.0 | 24.65 |
| CDY11271 | Canola | extracellular, plasma membrane | 29.0 | 23.71 |
| CDX76226 | Canola | extracellular, plasma membrane | 27.67 | 23.65 |
| CDX95394 | Canola | extracellular | 27.67 | 23.65 |
| CDY50286 | Canola | extracellular | 27.67 | 23.06 |
| CDY09169 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 27.67 | 22.99 |
| CDY54290 | Canola | extracellular | 23.0 | 22.92 |
| CDY15393 | Canola | cytosol | 15.0 | 20.45 |
| CDX75880 | Canola | vacuole | 16.0 | 15.48 |
| CDX85927 | Canola | extracellular, mitochondrion, plastid | 6.67 | 14.49 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | GO:A0A078DIL1 | EnsemblPlants:CDX89030 | ProteinID:CDX89030 | ProteinID:CDX89030.1 |
| InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016298 | GO:GO:0016787 | GO:GO:0016788 | EnsemblPlantsGene:GSBRNA2T00149146001 | InterPro:IPR036514 | InterPro:Lipase_GDSL_AS |
| PFAM:PF00657 | ScanProsite:PS01098 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF330 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EF0FB4 | SEG:seg | : | : |
Description
BnaA04g01560D
Coordinates
chrLK031857:-:618815..620042
Molecular Weight (calculated)
33083.9 Da
IEP (calculated)
10.558
GRAVY (calculated)
0.126
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRKKILVLA FISIYFLSTV AANGSFPALF AFGDSILDTG NNNFLLTLMK GNIWPYGRSY TMKLPTGRFG NGRVFSDVVA EGLGIKKTLP ASRKVFIAPS
101: DLKTGVCFAS GGAGVDPVTS RLMRVLTPGD QISDYKKYIM KLKVVAPTQA SSIIANAVYL VSQGNNDIGI SFSMTRSALM RGIVTRGMYT TKLTGWNKKF
201: MKQIYDQGAR KFAVMGVIPL GCLPMTRIVG KCNLFANILA EDYNGKLRNG VKTWPKEAGF RGSKFVYVDM FNTLMDVIKN YRKYGTLIYA AYIIYISSTH
101: DLKTGVCFAS GGAGVDPVTS RLMRVLTPGD QISDYKKYIM KLKVVAPTQA SSIIANAVYL VSQGNNDIGI SFSMTRSALM RGIVTRGMYT TKLTGWNKKF
201: MKQIYDQGAR KFAVMGVIPL GCLPMTRIVG KCNLFANILA EDYNGKLRNG VKTWPKEAGF RGSKFVYVDM FNTLMDVIKN YRKYGTLIYA AYIIYISSTH
001: MCSKITLVLT LFSSYFISTD AVNGSFPALL AFGDSILDTG NNNFLLTFMK GNIWPYGRSF SMRRATGRFG NGRVFSDIVA EGLGIKKILP AYRKLFNSPS
101: DLRTGVCFAS GGAGVDPVTS KLLRVLTPKD QVNDFKGYIR KLKATAGPSR ASSIVSNAVI LVSQGNNDIG ISYFGTPTAA FRGLTPNRYT TKLAGWNKQF
201: MKELYDQGAR KFAVMGVIPL GCLPMTRIFL GGFVITCNFF ANRVAEQYNG KLRSGTKSWG REAGFRGAKF VYVDMYNTLM DVIKNYRRYG FSNEKNGCCC
301: MITAIIPCPN PDKYVFYDFV HPSEKAYRTI SKKLVQDIKN GLA
101: DLRTGVCFAS GGAGVDPVTS KLLRVLTPKD QVNDFKGYIR KLKATAGPSR ASSIVSNAVI LVSQGNNDIG ISYFGTPTAA FRGLTPNRYT TKLAGWNKQF
201: MKELYDQGAR KFAVMGVIPL GCLPMTRIFL GGFVITCNFF ANRVAEQYNG KLRSGTKSWG REAGFRGAKF VYVDMYNTLM DVIKNYRRYG FSNEKNGCCC
301: MITAIIPCPN PDKYVFYDFV HPSEKAYRTI SKKLVQDIKN GLA
Arabidopsis Description
EXL4GDSL esterase/lipase EXL4 [Source:UniProtKB/Swiss-Prot;Acc:Q0WUV7]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.