Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0002g03050.t01 | Wine grape | extracellular | 11.96 | 34.29 |
| CDY25788 | Canola | extracellular | 34.22 | 30.21 |
| CDY04705 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 31.89 | 27.04 |
| CDY44153 | Canola | cytosol | 31.23 | 26.7 |
| CDY54289 | Canola | extracellular | 29.57 | 25.87 |
| CDY15394 | Canola | extracellular | 10.3 | 25.41 |
| CDX72994 | Canola | extracellular | 28.57 | 25.37 |
| CDX96486 | Canola | extracellular, plasma membrane | 28.24 | 25.07 |
| CDX89030 | Canola | plasma membrane | 22.92 | 23.0 |
| CDY45740 | Canola | plasma membrane | 25.58 | 22.78 |
| CDY30744 | Canola | extracellular | 25.25 | 22.49 |
| CDY43409 | Canola | extracellular, plasma membrane | 25.25 | 22.35 |
| CDY45771 | Canola | extracellular, plasma membrane | 24.92 | 21.99 |
| CDY13524 | Canola | extracellular, plasma membrane | 23.59 | 20.82 |
| CDY67584 | Canola | extracellular, plasma membrane | 23.59 | 20.82 |
| CDY39069 | Canola | extracellular, plasma membrane | 23.59 | 20.82 |
| CDY67583 | Canola | extracellular | 23.59 | 20.7 |
| CDY56196 | Canola | vacuole | 22.59 | 18.99 |
| CDY14175 | Canola | extracellular, plasma membrane | 20.6 | 18.96 |
| CDY30167 | Canola | extracellular | 22.26 | 18.93 |
| CDX95394 | Canola | extracellular | 21.93 | 18.8 |
| CDY04898 | Canola | extracellular, plasma membrane | 21.26 | 18.29 |
| CDX76226 | Canola | extracellular, plasma membrane | 21.26 | 18.23 |
| CDY50286 | Canola | extracellular | 21.26 | 17.78 |
| CDY09169 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 21.26 | 17.73 |
| CDX80889 | Canola | extracellular, plasma membrane | 19.6 | 16.71 |
| CDY57589 | Canola | plasma membrane | 25.91 | 16.7 |
| CDY11271 | Canola | extracellular, plasma membrane | 19.93 | 16.35 |
| CDY13523 | Canola | golgi, plasma membrane, plastid | 16.28 | 14.12 |
| CDX75880 | Canola | vacuole | 12.96 | 12.58 |
| CDY15393 | Canola | cytosol | 8.97 | 12.27 |
| CDX85927 | Canola | extracellular, mitochondrion, plastid | 4.65 | 10.14 |
| CDY39070 | Canola | extracellular | 4.98 | 10.14 |
Protein Annotations
| EnsemblPlants:CDY54290 | EnsemblPlantsGene:GSBRNA2T00013770001 | GO:A0A078IT20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016298 | GO:GO:0016787 | InterPro:Lipase_GDSL_AS | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF330 | ProteinID:CDY54290 | ProteinID:CDY54290.1 | ScanProsite:PS01098 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0004EEA536 | UniProt:A0A078IT20 | MapMan:35.1 | : | : |
Description
BnaC07g48310DBnaC07g48310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IT20]
Coordinates
chrLK033299:-:38260..42348
Molecular Weight (calculated)
32965.8 Da
IEP (calculated)
10.688
GRAVY (calculated)
-0.209
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVSLLYTML LALALSCVCL FFLGHAHPQE LSGQAKVSAL FAFGDSILDT GNNNHLRTQI KCNVPYGRNF VGGKATGRFG NGRVFADIIV VLLCSAAEGL
101: ILKPLLPAYH DPNLSNSDLP TRGYVGARSH PGAKFAYVDM YISLLGLINN PQASGNVLIR PVPSRSGLVF ERVTADKTRK NPWRELDLLF RWKVSFQTSY
201: DDSKKIHRCR SKALGRPEAS STLKPPSPSY ITSSRLLSLS LNVLGENKNG DLGLGSSKSR RLSSSRFRPV PRGPQFCGLT KWRPYPAPQR AFTSQAHGPG
301: H
101: ILKPLLPAYH DPNLSNSDLP TRGYVGARSH PGAKFAYVDM YISLLGLINN PQASGNVLIR PVPSRSGLVF ERVTADKTRK NPWRELDLLF RWKVSFQTSY
201: DDSKKIHRCR SKALGRPEAS STLKPPSPSY ITSSRLLSLS LNVLGENKNG DLGLGSSKSR RLSSSRFRPV PRGPQFCGLT KWRPYPAPQR AFTSQAHGPG
301: H
001: MNFSLLSTML MALSSVCLFF VGYAQQFSGS VAVSALFAFG DSILDTGNNN NLNTLSKCNF FPYGRNFIGG KATGRFGNGR VFSDMIAEGL NVKKLLPAYR
101: DPNLSKNDLP TGVCFASGGS GLDERTARSQ GVIWVPDQVK DFKEYIMKLN GVVRDKRKVN AIISNAVYLI SAGNNDLAIT YPTLMAQYTV STYTDLLVTW
201: TDNLLKSLYA MGARKFAVLG TLPLGCLPGA RHTGGNFGNI CLVPINQVAA IFNQKLSAKL NNLHTILPGA KFVYVDMYNP LLNLINNPRA SGFIDVADGC
301: CCMPTSPVPC PDASQYVFWD FAHPSEKSYM TIAPKIIEGI KKNLA
101: DPNLSKNDLP TGVCFASGGS GLDERTARSQ GVIWVPDQVK DFKEYIMKLN GVVRDKRKVN AIISNAVYLI SAGNNDLAIT YPTLMAQYTV STYTDLLVTW
201: TDNLLKSLYA MGARKFAVLG TLPLGCLPGA RHTGGNFGNI CLVPINQVAA IFNQKLSAKL NNLHTILPGA KFVYVDMYNP LLNLINNPRA SGFIDVADGC
301: CCMPTSPVPC PDASQYVFWD FAHPSEKSYM TIAPKIIEGI KKNLA
Arabidopsis Description
GDSL esterase/lipase At1g23500 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUE4]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.