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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005782.1-P Field mustard extracellular, plasma membrane 98.3 98.3
Bra005781.1-P Field mustard plastid 58.07 98.09
CDY11271 Canola extracellular, plasma membrane 94.05 90.46
CDY04898 Canola extracellular, plasma membrane 83.57 84.29
AT5G03810.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 80.74 80.74
CDY14175 Canola extracellular, plasma membrane 74.22 80.12
AT5G03820.2 Thale cress endoplasmic reticulum, extracellular, plasma membrane 81.02 74.29
GSMUA_Achr4P17640_001 Banana extracellular, plasma membrane 65.16 64.25
CDX76226 Canola extracellular, plasma membrane 59.77 60.11
CDX95394 Canola extracellular 59.77 60.11
CDY09169 Canola endoplasmic reticulum, extracellular, plasma membrane 60.91 59.56
CDY50286 Canola extracellular 60.62 59.44
TraesCS4A01G285700.1 Wheat endoplasmic reticulum, plasma membrane 58.07 58.07
Os03t0683800-01 Rice plastid 58.36 57.7
TraesCS4D01G024900.1 Wheat endoplasmic reticulum, plasma membrane 58.07 56.63
TraesCS4B01G027100.1 Wheat endoplasmic reticulum, plasma membrane 58.07 56.32
CDY30167 Canola extracellular 56.37 56.21
CDY56196 Canola vacuole 56.94 56.15
HORVU4Hr1G004100.1 Barley endoplasmic reticulum, plasma membrane 58.07 55.86
EER93662 Sorghum endoplasmic reticulum, plasma membrane 57.22 55.8
Zm00001d033522_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 56.66 55.71
GSMUA_Achr2P12520_001 Banana plastid 58.92 52.53
CDX85927 Canola extracellular, mitochondrion, plastid 14.73 37.68
CDY30744 Canola extracellular 33.99 35.5
CDY45740 Canola plasma membrane 33.71 35.21
CDY15393 Canola cytosol 21.53 34.55
CDY25788 Canola extracellular 32.58 33.72
CDX72994 Canola extracellular 32.29 33.63
CDX75880 Canola vacuole 29.46 33.55
CDX96486 Canola extracellular, plasma membrane 32.01 33.33
CDY39070 Canola extracellular 13.6 32.43
CDY44153 Canola cytosol 32.29 32.39
CDY54289 Canola extracellular 31.44 32.27
CDY43409 Canola extracellular, plasma membrane 30.88 32.06
CDY15394 Canola extracellular 11.05 31.97
CDY04705 Canola cytosol, mitochondrion, plasma membrane, plastid 32.01 31.83
CDY67583 Canola extracellular 30.03 30.9
CDY39069 Canola extracellular, plasma membrane 29.18 30.21
CDY13524 Canola extracellular, plasma membrane 29.18 30.21
CDY67584 Canola extracellular, plasma membrane 29.18 30.21
CDY45771 Canola extracellular, plasma membrane 28.61 29.62
CDX89030 Canola plasma membrane 24.65 29.0
CDY13523 Canola golgi, plasma membrane, plastid 25.21 25.65
CDY57589 Canola plasma membrane 30.88 23.34
CDY54290 Canola extracellular 16.71 19.6
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1GO:A0A078CXX7EnsemblPlants:CDX80889ProteinID:CDX80889ProteinID:CDX80889.1
InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008150GO:GO:0008152
GO:GO:0016298GO:GO:0016787GO:GO:0016788EnsemblPlantsGene:GSBRNA2T00134289001InterPro:IPR036514InterPro:Lipase_GDSL_AS
PFAM:PF00657ScanProsite:PS01098PANTHER:PTHR22835PANTHER:PTHR22835:SF146InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
SUPFAM:SSF52266SignalP:SignalP-noTMUniParc:UPI0004EC4BA4:::
Description
BnaC03g01430D
Coordinates
chrLK031823:-:663392..665342
Molecular Weight (calculated)
38270.7 Da
IEP (calculated)
6.898
GRAVY (calculated)
0.084
Length
353 amino acids
Sequence
(BLAST)
001: MFTRLISFLV LTGFYAGFGT GQPLVPALII MGDSVVDAGN NNLRLTLVKA NFPPYGRDFL AHTATGRFSN GKLAIDFTAE NLGFTSYPVA YLSQDAANET
101: NLLTGANFAS GASGYHDGTS LLYNAISLTQ QVENYKEYQS KVTSIVGKDK ANEIFKGAIH LLSTGSSDFL QSYYINPILN VIVTPDRFSD RLMRFYSTVI
201: QNMYDLGARR IGVTSLPPLG CLPAAITMFG GIGSNTCVER LNRDAVSFNT KLNNTSVNLA NKLPGLKLVV FDIYNPLLNM VMKPEENGFF ESRRACCGTG
301: TVETSFLCNA LSVGTCSNAT SYVFWDGFHP SEAANRVLAD NLLGQGFSLI SQT
Best Arabidopsis Sequence Match ( AT5G03810.1 )
(BLAST)
001: MKMFITMSMC LSVIACFYAG VGTGETLVPA LIIMGDSVVD AGNNNHRITL VKANFPPYGR DFVAHSATGR FSNGKLATDF TAENLGFTSY PVAYLSQEAN
101: ETNLLTGANF ASGASGFDDA TAIFYNAITL SQQLKNYKEY QNKVTNIVGK ERANEIFSGA IHLLSTGSSD FLQSYYINPI LNRIFTPDQY SDHLLRSYST
201: FVQNLYGLGA RRIGVTTLPP LGCLPAAITL FGGVGNNMCV ERLNQDAVSF NTKLNNTSIN LTNNLPGLKL VVFDIYNPLL NMVINPVEYG FFESRRACCG
301: TGTMETSFLC NALSVGTCSN ATNYVFWDGF HPSEAANRVI ANNLLVQGIP LIS
Arabidopsis Description
GDSL esterase/lipase At5g03810 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFN0]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.