CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04898	Canola	extracellular, plasma membrane	92.66	86.57
AT5G03810.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	81.04	75.07
CDX80889	Canola	extracellular, plasma membrane	80.12	74.22
AT5G03820.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	82.57	70.13
CDY11271	Canola	extracellular, plasma membrane	77.68	69.21
GSMUA_Achr4P17640_001	Banana	extracellular, plasma membrane	60.55	55.31
CDX76226	Canola	extracellular, plasma membrane	58.41	54.42
CDX95394	Canola	extracellular	58.1	54.13
CDY09169	Canola	endoplasmic reticulum, extracellular, plasma membrane	58.41	52.91
CDY50286	Canola	extracellular	58.1	52.78
TraesCS4A01G285700.1	Wheat	endoplasmic reticulum, plasma membrane	55.66	51.56
Os03t0683800-01	Rice	plastid	56.27	51.54
TraesCS4D01G024900.1	Wheat	endoplasmic reticulum, plasma membrane	55.66	50.28
HORVU4Hr1G004100.1	Barley	endoplasmic reticulum, plasma membrane	56.27	50.14
TraesCS4B01G027100.1	Wheat	endoplasmic reticulum, plasma membrane	55.66	50.0
EER93662	Sorghum	endoplasmic reticulum, plasma membrane	54.74	49.45
Zm00001d033522_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	54.13	49.3
CDY56196	Canola	vacuole	53.21	48.6
CDY30167	Canola	extracellular	52.6	48.59
GSMUA_Achr2P12520_001	Banana	plastid	56.27	46.46
CDX85927	Canola	extracellular, mitochondrion, plastid	16.51	39.13
CDY15393	Canola	cytosol	22.94	34.09
CDY30744	Canola	extracellular	35.17	34.02
CDY45740	Canola	plasma membrane	35.17	34.02
CDY39070	Canola	extracellular	15.29	33.78
CDY25788	Canola	extracellular	35.17	33.72
CDX75880	Canola	vacuole	31.8	33.55
CDX72994	Canola	extracellular	33.33	32.15
CDX96486	Canola	extracellular, plasma membrane	33.33	32.15
CDY54289	Canola	extracellular	33.64	31.98
CDY44153	Canola	cytosol	34.25	31.82
CDY43409	Canola	extracellular, plasma membrane	32.42	31.18
CDY04705	Canola	cytosol, mitochondrion, plasma membrane, plastid	33.64	30.99
CDY67583	Canola	extracellular	31.19	29.74
CDY67584	Canola	extracellular, plasma membrane	30.58	29.33
CDY13524	Canola	extracellular, plasma membrane	30.58	29.33
CDY39069	Canola	extracellular, plasma membrane	30.58	29.33
CDY45771	Canola	extracellular, plasma membrane	29.97	28.74
CDY15394	Canola	extracellular	10.7	28.69
CDX89030	Canola	plasma membrane	25.38	27.67
CDY13523	Canola	golgi, plasma membrane, plastid	26.91	25.36
CDY57589	Canola	plasma membrane	32.11	22.48
CDY54290	Canola	extracellular	18.96	20.6

Protein Annotations

EnsemblPlants:CDY14175	EnsemblPlantsGene:GSBRNA2T00078729001	Gene3D:3.40.50.1110	GO:A0A078FIB4	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF146	PFAM:PF00657	ProteinID:CDY14175	ProteinID:CDY14175.1	SignalP:SignalP-TM
SUPFAM:SSF52266	TMHMM:TMhelix	UniParc:UPI0004EE290F	UniProt:A0A078FIB4	MapMan:35.1	:

Description

BnaC02g02920DBnaC02g02920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FIB4]

Coordinates

chrLK032040:+:791139..793825

Molecular Weight (calculated)

35879.1 Da

IEP (calculated)

9.269

GRAVY (calculated)

0.069

Length

327 amino acids

Sequence
(BLAST)

001: MFIRMISLLV LAGFYVGVGT GQCLVPALII MGYSVVDAGN NNRRTTLIKA NFPPYGRDFF AHNSTGRFSN GKLVTDFIAE TNFASGASGF DDGTSLLYNA
101: ITLNQQLKSY KEYKSKVTNM VGRDRANDIF SRATYLLSTG SSDFLQSYYI NPILNRIFTP DRYSDRLMNF YSTFVQNLYN LGARRIGVTT LPPLGCLPSA
201: ITMFGGAGNN TCVERLNRDA VSFNTKLNNT SMYLTNKLPG LKLVVLDIYN PLMSMVVNPV ANGTFFESRR ACCGTGTLET SFLCNARSVG TCSNATSYVF
301: WDGFHPSEAA NRIIAANLLV QGISLIS

Best Arabidopsis Sequence Match ( AT5G03820.1 )
(BLAST)

001: MNKMKMFIIM LMTFSVIACF YAGVGTGEPL VPALIIMGDS VVDAGNNNRL NTLIKANFPP YGRDFLAHNA TGRFSNGKLA TDFTAESLGF TSYPVPYLSQ
101: EANGTNLLTG ANFASGASGY DDGTAIFYNA ITLNQQLKNY KEYQNKVTNI VGSERANKIF SGAIHLLSTG SSDFLQSYYI NPILNRIFTP DQYSDRLMKP
201: YSTFVQNLYD LGARKIGVTT LPPLGCLPAA ITLFGETGNN NTCVERLNQD AVSFNTKLNN TSMNLTNNLP GLKLVVFDIY NPLLNMAMNP VENGFFESRR
301: ACCGTGTVET SFLCNARSVG TCSNATNYVF WDGFHPSEAA NRVIANNLLV QGIPLIS

Arabidopsis Description

GDSL-like Lipase/Acylhydrolase family protein [Source:TAIR;Acc:AT5G03820]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.