CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44153	Canola	cytosol	94.65	95.45
CDY25788	Canola	extracellular	73.8	76.83
AT1G23500.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	71.55	73.62
CDY54289	Canola	extracellular	67.61	69.77
CDX72994	Canola	extracellular	64.51	67.55
CDX96486	Canola	extracellular, plasma membrane	64.23	67.26
CDY30744	Canola	extracellular	50.7	53.25
CDY45740	Canola	plasma membrane	50.7	53.25
CDY43409	Canola	extracellular, plasma membrane	47.61	49.71
CDY67583	Canola	extracellular	43.38	44.9
CDY45771	Canola	extracellular, plasma membrane	43.1	44.87
CDY39069	Canola	extracellular, plasma membrane	41.13	42.82
CDY67584	Canola	extracellular, plasma membrane	41.13	42.82
CDY13524	Canola	extracellular, plasma membrane	41.13	42.82
CDX89030	Canola	plasma membrane	36.06	42.67
CDY39070	Canola	extracellular	17.75	42.57
KRH17464	Soybean	extracellular	43.94	42.51
KRH05981	Soybean	extracellular	43.38	42.08
CDY13523	Canola	golgi, plasma membrane, plastid	36.62	37.46
CDY57589	Canola	plasma membrane	47.89	36.4
CDX85927	Canola	extracellular, mitochondrion, plastid	13.8	35.51
VIT_09s0002g03050.t01	Wine grape	extracellular	10.42	35.24
CDY14175	Canola	extracellular, plasma membrane	30.99	33.64
CDY30167	Canola	extracellular	32.96	33.05
CDY56196	Canola	vacuole	32.96	32.68
CDY04898	Canola	extracellular, plasma membrane	32.11	32.57
CDX80889	Canola	extracellular, plasma membrane	31.83	32.01
CDY54290	Canola	extracellular	27.04	31.89
CDX95394	Canola	extracellular	30.7	31.05
CDY11271	Canola	extracellular, plasma membrane	31.83	30.79
CDX76226	Canola	extracellular, plasma membrane	30.42	30.77
CDY15393	Canola	cytosol	18.59	30.0
CDY09169	Canola	endoplasmic reticulum, extracellular, plasma membrane	30.42	29.92
CDY50286	Canola	extracellular	30.14	29.72
CDY15394	Canola	extracellular	9.86	28.69
CDX75880	Canola	vacuole	19.72	22.58

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	GO:A0A078ES28	EnsemblPlants:CDY04705	ProteinID:CDY04705	ProteinID:CDY04705.1
InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0016298	GO:GO:0016787	GO:GO:0016788	EnsemblPlantsGene:GSBRNA2T00119338001	InterPro:IPR036514	InterPro:Lipase_GDSL_AS
PFAM:PF00657	ScanProsite:PS01098	PANTHER:PTHR22835	PANTHER:PTHR22835:SF330	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
SUPFAM:SSF52266	SignalP:SignalP-noTM	UniParc:UPI0004EED6E1	:	:	:

Description

BnaC05g18840D

Coordinates

chrLK031957:-:25474..27535

Molecular Weight (calculated)

38775.1 Da

IEP (calculated)

5.195

GRAVY (calculated)

-0.096

Length

355 amino acids

Sequence
(BLAST)

001: MLLRHLLAIL KLCRTEDIYK DDNQVVLEFD IRTWIVNELS GNARVSALFA FGDSMLDTGN NNNLRTLTKC NFFPYGRDFA GGKATGRFGN GRVFSDLIAE
101: GLSLKTLLPA YRDPNLSNND LSTGVCFASG GSGLDERTAS SQGVIWVTDQ VKDFKEYVTR LNGVVGEQTN ALISNAVYLI SAGNNDLAIT FATGRAQSTI
201: SDYTDLMVTW TDNLLKSLYD TGARKFAVLG TLPLGCLPGA RDAAGNFLKV CAYPANQWAD TFNKKLAAKL NNLGTTLPGS KFVYVDMYNS LLDLINNPQA
301: SGFIDAADGC YMPTISPVPC PDASRYVFWD IGHPSEKSYQ TISPKIIEEL KEKLA

Best Arabidopsis Sequence Match ( AT1G23500.1 )
(BLAST)

001: MNFSLLSTML MALSSVCLFF VGYAQQFSGS VAVSALFAFG DSILDTGNNN NLNTLSKCNF FPYGRNFIGG KATGRFGNGR VFSDMIAEGL NVKKLLPAYR
101: DPNLSKNDLP TGVCFASGGS GLDERTARSQ GVIWVPDQVK DFKEYIMKLN GVVRDKRKVN AIISNAVYLI SAGNNDLAIT YPTLMAQYTV STYTDLLVTW
201: TDNLLKSLYA MGARKFAVLG TLPLGCLPGA RHTGGNFGNI CLVPINQVAA IFNQKLSAKL NNLHTILPGA KFVYVDMYNP LLNLINNPRA SGFIDVADGC
301: CCMPTSPVPC PDASQYVFWD FAHPSEKSYM TIAPKIIEGI KKNLA

Arabidopsis Description

GDSL esterase/lipase At1g23500 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUE4]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.