Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G31550.1 | Thale cress | cytosol | 73.18 | 73.52 |
| KRH72762 | Soybean | cytosol | 31.36 | 39.2 |
| CDX85927 | Canola | extracellular, mitochondrion, plastid | 21.36 | 34.06 |
| CDY39070 | Canola | extracellular | 20.0 | 29.73 |
| PGSC0003DMT400020220 | Potato | cytosol | 40.45 | 27.47 |
| CDY14175 | Canola | extracellular, plasma membrane | 34.09 | 22.94 |
| CDY50286 | Canola | extracellular | 35.91 | 21.94 |
| CDY09169 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 35.91 | 21.88 |
| CDX80889 | Canola | extracellular, plasma membrane | 34.55 | 21.53 |
| CDY04898 | Canola | extracellular, plasma membrane | 33.64 | 21.14 |
| CDY45740 | Canola | plasma membrane | 31.82 | 20.71 |
| CDY30744 | Canola | extracellular | 31.82 | 20.71 |
| CDX72994 | Canola | extracellular | 31.82 | 20.65 |
| CDX96486 | Canola | extracellular, plasma membrane | 31.82 | 20.65 |
| CDY30167 | Canola | extracellular | 33.18 | 20.62 |
| HORVU3Hr1G089960.1 | Barley | plastid | 19.09 | 20.49 |
| CDY56196 | Canola | vacuole | 33.18 | 20.39 |
| CDX76226 | Canola | extracellular, plasma membrane | 31.82 | 19.94 |
| CDX95394 | Canola | extracellular | 31.82 | 19.94 |
| CDY11271 | Canola | extracellular, plasma membrane | 33.18 | 19.89 |
| CDY43409 | Canola | extracellular, plasma membrane | 30.0 | 19.41 |
| CDY04705 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 30.0 | 18.59 |
| CDY44153 | Canola | cytosol | 29.09 | 18.18 |
| CDY25788 | Canola | extracellular | 27.73 | 17.89 |
| CDY67583 | Canola | extracellular | 27.73 | 17.78 |
| CDY13523 | Canola | golgi, plasma membrane, plastid | 27.73 | 17.58 |
| CDY45771 | Canola | extracellular, plasma membrane | 26.36 | 17.01 |
| CDY54289 | Canola | extracellular | 25.91 | 16.57 |
| CDY13524 | Canola | extracellular, plasma membrane | 25.45 | 16.42 |
| CDY67584 | Canola | extracellular, plasma membrane | 25.45 | 16.42 |
| CDY39069 | Canola | extracellular, plasma membrane | 25.45 | 16.42 |
| CDX89030 | Canola | plasma membrane | 20.45 | 15.0 |
| CDY57589 | Canola | plasma membrane | 30.0 | 14.13 |
| CDX75880 | Canola | vacuole | 19.09 | 13.55 |
| CDY54290 | Canola | extracellular | 12.27 | 8.97 |
| CDY15394 | Canola | extracellular | 0.45 | 0.82 |
| Solyc05g043310.1.1 | Tomato | extracellular | 0.45 | 0.75 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | GO:A0A078FSW3 | UniProt:A0A078FSW3 | EnsemblPlants:CDY15393 | ProteinID:CDY15393 |
| ProteinID:CDY15393.1 | InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 | GO:GO:0016788 |
| EnsemblPlantsGene:GSBRNA2T00085699001 | InterPro:IPR036514 | PFAM:PF00657 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF152 | InterPro:SGNH_hydro_sf |
| SUPFAM:SSF52266 | TMHMM:TMhelix | UniParc:UPI0004EE6567 | : | : | : |
Description
BnaC04g42300DBnaC04g42300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSW3]
Coordinates
chrLK032054:-:589454..590499
Molecular Weight (calculated)
25112.4 Da
IEP (calculated)
6.885
GRAVY (calculated)
-0.060
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MFKSYIARLK SIVGDMKATE IINNALVVIS AGTNDFILNY YTIPSRRLQY HHVSSYQDFI LKRLDNLIGE LYSLGCRNIV IGGLPPIGCL PIQMTAKFRN
101: IFRFCLEQEN KDSVVYNQKL QKQIPQMQAS LTGSKILYSD IYNPIYDMMQ NPGKYGIDTT FLRGCCGTGF LETSFMCNVL SQTCDNHSEF LFFDSIHPSE
201: ATYNYIGDLL DTQIREWIAA
101: IFRFCLEQEN KDSVVYNQKL QKQIPQMQAS LTGSKILYSD IYNPIYDMMQ NPGKYGIDTT FLRGCCGTGF LETSFMCNVL SQTCDNHSEF LFFDSIHPSE
201: ATYNYIGDLL DTQIREWIAA
001: MFKSYIARLK GIVGDKKAME IINNAFVVVS AGPNDFILNY YDIPSRRLEY PFISGYQDFI LKRLENFVRE LYSLGVRNVL VGGLPPMGCL PIHMTAKFRN
101: IFRFCLEHHN KDSVLYNEKL QKLLPQIEAS LPGSKFLYAD VYNPMMEMIQ NPSKYGFKET KRGCCGTGFL ETSFMCNVFS PVCQNRSEFM FFDSIHPSEA
201: TYNVIGNRLD PLIRGKFQA
101: IFRFCLEHHN KDSVLYNEKL QKLLPQIEAS LPGSKFLYAD VYNPMMEMIQ NPSKYGFKET KRGCCGTGFL ETSFMCNVFS PVCQNRSEFM FFDSIHPSEA
201: TYNVIGNRLD PLIRGKFQA
Arabidopsis Description
SGNH hydrolase-type esterase superfamily protein [Source:TAIR;Acc:AT2G31550]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.