Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15393 | Canola | cytosol | 73.52 | 73.18 |
| KRH72762 | Soybean | cytosol | 29.68 | 36.93 |
| PGSC0003DMT400020220 | Potato | cytosol | 39.73 | 26.85 |
| AT5G03810.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 37.9 | 23.51 |
| HORVU3Hr1G089960.1 | Barley | plastid | 21.46 | 22.93 |
| AT5G63170.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 34.25 | 22.19 |
| AT3G16370.1 | Thale cress | endoplasmic reticulum, vacuole | 34.7 | 21.53 |
| AT1G20135.1 | Thale cress | extracellular, plasma membrane | 31.96 | 21.34 |
| AT5G22810.1 | Thale cress | extracellular | 34.7 | 21.17 |
| AT5G03820.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 36.99 | 21.04 |
| AT1G23500.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 31.96 | 20.29 |
| AT3G53100.1 | Thale cress | extracellular | 32.42 | 20.23 |
| AT1G75910.1 | Thale cress | endoplasmic reticulum, plasma membrane | 30.59 | 19.53 |
| AT1G73610.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 30.14 | 19.19 |
| AT1G75920.1 | Thale cress | plasma membrane | 30.59 | 18.98 |
| AT1G75930.1 | Thale cress | extracellular, plasma membrane | 29.68 | 18.95 |
| Solyc05g043310.1.1 | Tomato | extracellular | 0.91 | 1.5 |
Protein Annotations
| ArrayExpress:AT2G31550 | EnsemblPlants:AT2G31550.1 | EnsemblPlantsGene:AT2G31550 | Gene3D:3.40.50.1110 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | GO:GO:0016788 | InterPro:GDSL | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF152 | PFAM:PF00657 | PO:PO:0025195 | RefSeq:AT2G31550 | RefSeq:AT2G31550-TAIR-G | SUPFAM:SSF52266 |
| TAIR:AT2G31550 | TAIR:AT2G31550.1 | Unigene:At.52994 | UniParc:UPI00000A8AE4 | MapMan:35.1 | : |
Description
SGNH hydrolase-type esterase superfamily protein [Source:TAIR;Acc:AT2G31550]
Coordinates
chr2:-:13433797..13435207
Molecular Weight (calculated)
25162.8 Da
IEP (calculated)
8.944
GRAVY (calculated)
-0.109
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MFKSYIARLK GIVGDKKAME IINNAFVVVS AGPNDFILNY YDIPSRRLEY PFISGYQDFI LKRLENFVRE LYSLGVRNVL VGGLPPMGCL PIHMTAKFRN
101: IFRFCLEHHN KDSVLYNEKL QKLLPQIEAS LPGSKFLYAD VYNPMMEMIQ NPSKYGFKET KRGCCGTGFL ETSFMCNVFS PVCQNRSEFM FFDSIHPSEA
201: TYNVIGNRLD PLIRGKFQA
101: IFRFCLEHHN KDSVLYNEKL QKLLPQIEAS LPGSKFLYAD VYNPMMEMIQ NPSKYGFKET KRGCCGTGFL ETSFMCNVFS PVCQNRSEFM FFDSIHPSEA
201: TYNVIGNRLD PLIRGKFQA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.