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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • endoplasmic reticulum 6
  • golgi 5
  • extracellular 6
  • vacuole 4
  • plasma membrane 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:secretory
BaCelLo:endoplasmic reticulum, extracellular, golgi
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY04898 Canola extracellular, plasma membrane 83.0 83.71
Bra028818.1-P Field mustard extracellular, plasma membrane 82.72 83.43
AT5G03820.2 Thale cress endoplasmic reticulum, extracellular, plasma membrane 90.08 82.6
Bra005781.1-P Field mustard plastid 48.73 82.3
CDY14175 Canola extracellular, plasma membrane 75.07 81.04
CDX80889 Canola extracellular, plasma membrane 80.74 80.74
Bra005782.1-P Field mustard extracellular, plasma membrane 80.45 80.45
CDY11271 Canola extracellular, plasma membrane 77.05 74.11
GSMUA_Achr4P17640_001 Banana extracellular, plasma membrane 65.72 64.8
AT5G22810.1 Thale cress extracellular 61.19 60.17
AT3G53100.1 Thale cress extracellular 59.21 59.54
TraesCS4A01G285700.1 Wheat endoplasmic reticulum, plasma membrane 58.92 58.92
Os03t0683800-01 Rice plastid 58.92 58.26
TraesCS4D01G024900.1 Wheat endoplasmic reticulum, plasma membrane 58.92 57.46
Zm00001d033522_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 58.07 57.1
TraesCS4B01G027100.1 Wheat endoplasmic reticulum, plasma membrane 58.64 56.87
HORVU4Hr1G004100.1 Barley endoplasmic reticulum, plasma membrane 58.92 56.68
EER93662 Sorghum endoplasmic reticulum, plasma membrane 58.07 56.63
GSMUA_Achr2P12520_001 Banana plastid 61.47 54.8
AT3G16370.1 Thale cress endoplasmic reticulum, vacuole 54.67 54.67
AT5G63170.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 37.96 39.65
AT2G31550.1 Thale cress cytosol 23.51 37.9
AT1G23500.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 36.83 37.68
AT1G73610.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 34.56 35.47
AT1G20135.1 Thale cress extracellular, plasma membrane 31.44 33.84
AT1G75910.1 Thale cress endoplasmic reticulum, plasma membrane 32.86 33.82
AT1G75930.1 Thale cress extracellular, plasma membrane 31.44 32.36
AT1G75920.1 Thale cress plasma membrane 31.44 31.44
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1EntrezGene:831715ProteinID:ABZ85648.1ProteinID:ABZ85649.1ProteinID:ABZ85650.1
ProteinID:ABZ85651.1ProteinID:ABZ85652.1ProteinID:ABZ85653.1ProteinID:ABZ85654.1ProteinID:ABZ85655.1ProteinID:ABZ85656.1
ProteinID:ABZ85657.1ProteinID:ABZ85658.1ProteinID:ABZ85659.1ProteinID:ABZ85660.1ProteinID:ABZ85661.1ProteinID:AED90657.1
ArrayExpress:AT5G03810EnsemblPlantsGene:AT5G03810RefSeq:AT5G03810TAIR:AT5G03810RefSeq:AT5G03810-TAIR-GEnsemblPlants:AT5G03810.1
TAIR:AT5G03810.1Unigene:At.54713ProteinID:BAB08607.1ProteinID:CAB85501.1InterPro:GDSLGO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005576GO:GO:0006629GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0016042GO:GO:0016298GO:GO:0016787GO:GO:0016788InterPro:IPR036514
InterPro:Lipase_GDSL_ASRefSeq:NP_196001.2PFAM:PF00657PO:PO:0025195ScanProsite:PS01098PFscan:PS51257
PANTHER:PTHR22835PANTHER:PTHR22835:SF146UniProt:Q9FFN0InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeSUPFAM:SSF52266
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00000A68B6SEG:seg::
Description
GDSL esterase/lipase At5g03810 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFN0]
Coordinates
chr5:-:1013939..1015345
Molecular Weight (calculated)
38356.8 Da
IEP (calculated)
6.342
GRAVY (calculated)
0.112
Length
353 amino acids
Sequence
(BLAST)
001: MKMFITMSMC LSVIACFYAG VGTGETLVPA LIIMGDSVVD AGNNNHRITL VKANFPPYGR DFVAHSATGR FSNGKLATDF TAENLGFTSY PVAYLSQEAN
101: ETNLLTGANF ASGASGFDDA TAIFYNAITL SQQLKNYKEY QNKVTNIVGK ERANEIFSGA IHLLSTGSSD FLQSYYINPI LNRIFTPDQY SDHLLRSYST
201: FVQNLYGLGA RRIGVTTLPP LGCLPAAITL FGGVGNNMCV ERLNQDAVSF NTKLNNTSIN LTNNLPGLKL VVFDIYNPLL NMVINPVEYG FFESRRACCG
301: TGTMETSFLC NALSVGTCSN ATNYVFWDGF HPSEAANRVI ANNLLVQGIP LIS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.