Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 6
- vacuole 4
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45740 | Canola | plasma membrane | 84.62 | 84.62 |
| CDY30744 | Canola | extracellular | 84.62 | 84.62 |
| Bra029234.1-P | Field mustard | plasma membrane | 84.32 | 84.32 |
| AT1G23500.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 58.88 | 57.68 |
| AT1G73610.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 57.99 | 56.98 |
| AT1G20135.1 | Thale cress | extracellular, plasma membrane | 55.03 | 56.71 |
| AT1G75910.1 | Thale cress | endoplasmic reticulum, plasma membrane | 48.82 | 48.1 |
| AT1G75930.1 | Thale cress | extracellular, plasma membrane | 44.67 | 44.02 |
| AT1G75920.1 | Thale cress | plasma membrane | 45.86 | 43.91 |
| KRH05981 | Soybean | extracellular | 45.56 | 42.08 |
| KRH17464 | Soybean | extracellular | 45.56 | 41.96 |
| AT5G03810.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 39.65 | 37.96 |
| AT3G16370.1 | Thale cress | endoplasmic reticulum, vacuole | 37.87 | 36.26 |
| VIT_09s0002g03050.t01 | Wine grape | extracellular | 11.24 | 36.19 |
| AT5G03820.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 39.65 | 34.81 |
| AT2G31550.1 | Thale cress | cytosol | 22.19 | 34.25 |
| AT5G22810.1 | Thale cress | extracellular | 35.21 | 33.15 |
| AT3G53100.1 | Thale cress | extracellular | 34.32 | 33.05 |
| TraesCS7D01G346800.1 | Wheat | cytosol, extracellular, mitochondrion | 13.31 | 32.14 |
| Zm00001d024117_P001 | Maize | cytosol, mitochondrion | 10.36 | 25.55 |
| Zm00001d044521_P001 | Maize | cytosol, mitochondrion | 10.36 | 25.55 |
| HORVU1Hr1G065930.2 | Barley | mitochondrion | 20.12 | 17.09 |
| Os06t0148600-01 | Rice | cytosol, golgi, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | EntrezGene:836438 | ProteinID:AED97714.1 | ArrayExpress:AT5G63170 | EnsemblPlantsGene:AT5G63170 |
| RefSeq:AT5G63170 | TAIR:AT5G63170 | RefSeq:AT5G63170-TAIR-G | EnsemblPlants:AT5G63170.1 | TAIR:AT5G63170.1 | Unigene:At.55688 |
| ProteinID:BAB10559.1 | InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016298 |
| GO:GO:0016787 | GO:GO:0016788 | InterPro:IPR036514 | InterPro:Lipase_GDSL_AS | RefSeq:NP_201122.1 | PFAM:PF00657 |
| ScanProsite:PS01098 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF330 | UniProt:Q9FMK6 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like |
| SUPFAM:SSF52266 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0000048CCE | SEG:seg | : |
Description
GDSL esterase/lipase At5g63170 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMK6]
Coordinates
chr5:-:25338699..25340096
Molecular Weight (calculated)
36914.7 Da
IEP (calculated)
8.332
GRAVY (calculated)
0.157
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSLVIQTTI VLVSVISVSI VHAGNIPAVI AFGDSILDTG NNNYLMTLTK VNFYPYGRDF VTRRATGRFG NGRIPTDLIA EGLGIKNIVP AYRSPFLEPN
101: DILTGVSFAS GGSGLDPMTA RIQGVIWVPD QLNDFKAYIA KLNSITGDEE KTRSIISNAV FVISAGNNDI AITYFTNPIR NTRYTIFSYT DLMVSWTQSF
201: IKELYNLGAR KFAIMGTLPL GCLPGASNAL GGLCLEPANA VARLFNRKLA DEVNNLNSML PGSRSIYVDM YNPLLELVKN PLRSGFISPT RPCCCAPAAP
301: IPCLDASRYV FWDIAHPSEK AYQTIIPPII QQIQQSFA
101: DILTGVSFAS GGSGLDPMTA RIQGVIWVPD QLNDFKAYIA KLNSITGDEE KTRSIISNAV FVISAGNNDI AITYFTNPIR NTRYTIFSYT DLMVSWTQSF
201: IKELYNLGAR KFAIMGTLPL GCLPGASNAL GGLCLEPANA VARLFNRKLA DEVNNLNSML PGSRSIYVDM YNPLLELVKN PLRSGFISPT RPCCCAPAAP
301: IPCLDASRYV FWDIAHPSEK AYQTIIPPII QQIQQSFA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.