Factsheet for TraesCS4D01G024900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G285700.1	Wheat	endoplasmic reticulum, plasma membrane	95.3	97.73
TraesCS4B01G027100.1	Wheat	endoplasmic reticulum, plasma membrane	96.96	96.43
HORVU4Hr1G004100.1	Barley	endoplasmic reticulum, plasma membrane	96.96	95.64
EER93662	Sorghum	endoplasmic reticulum, plasma membrane	85.08	85.08
Zm00001d033522_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	84.25	84.96
Os03t0683800-01	Rice	plastid	82.6	83.75
GSMUA_Achr4P17640_001	Banana	extracellular, plasma membrane	66.57	67.32
PGSC0003DMT400088508	Potato	extracellular	26.24	59.75
AT5G03810.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	57.46	58.92
VIT_08s0007g04300.t01	Wine grape	extracellular, vacuole	58.84	58.68
Bra005782.1-P	Field mustard	extracellular, plasma membrane	57.18	58.64
PGSC0003DMT400021670	Potato	extracellular	56.35	58.62
Bra005781.1-P	Field mustard	plastid	33.7	58.37
PGSC0003DMT400001233	Potato	extracellular, plasma membrane	56.91	58.36
CDX80889	Canola	extracellular, plasma membrane	56.63	58.07
Solyc10g085740.1.1	Tomato	extracellular	55.8	58.05
KRH26558	Soybean	endoplasmic reticulum, extracellular, vacuole	56.08	58.0
Solyc11g066700.1.1	Tomato	extracellular, plasma membrane	56.63	57.75
Bra028818.1-P	Field mustard	extracellular, plasma membrane	55.8	57.71
TraesCS7D01G093200.1	Wheat	extracellular	55.52	57.27
CDY04898	Canola	extracellular, plasma membrane	55.25	57.14
CDX95394	Canola	extracellular	54.97	56.7
GSMUA_Achr2P12520_001	Banana	plastid	61.88	56.57
CDY14175	Canola	extracellular, plasma membrane	50.28	55.66
Bra040686.1-P	Field mustard	extracellular, plasma membrane	53.87	55.56
CDX76226	Canola	extracellular, plasma membrane	53.87	55.56
AT3G53100.1	Thale cress	extracellular	53.59	55.27
CDY09169	Canola	endoplasmic reticulum, extracellular, plasma membrane	54.97	55.12
Bra020216.1-P	Field mustard	extracellular	54.7	55.0
CDY50286	Canola	extracellular	54.7	55.0
KRH30531	Soybean	extracellular, vacuole	53.59	54.96
AT5G22810.1	Thale cress	extracellular	54.42	54.87
CDY11271	Canola	extracellular, plasma membrane	54.42	53.68
AT5G03820.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	56.91	53.51
TraesCS7D01G094000.1	Wheat	extracellular	49.72	51.28
KRH25150	Soybean	extracellular	43.09	50.98
KRH22747	Soybean	mitochondrion	58.01	49.41
Solyc09g008690.1.1	Tomato	extracellular	31.49	48.72
PGSC0003DMT400033798	Potato	extracellular	31.22	48.29
TraesCS7D01G094500.1	Wheat	extracellular	46.69	47.88
TraesCS7D01G094900.1	Wheat	endoplasmic reticulum, golgi	47.51	47.51
TraesCS3D01G431500.1	Wheat	endoplasmic reticulum, golgi	48.07	44.05
TraesCS7D01G346800.1	Wheat	cytosol, extracellular, mitochondrion	12.71	32.86

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0016298	GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514
InterPro:Lipase_GDSL_AS	PFAM:PF00657	ScanProsite:PS01098	PFscan:PS51257	PANTHER:PTHR22835	PANTHER:PTHR22835:SF146
InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G024900
EnsemblPlants:TraesCS4D01G024900.1	TIGR:cd01837	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4D:+:10927981..10931145

Molecular Weight (calculated)

37977.2 Da

IEP (calculated)

6.233

GRAVY (calculated)

0.172

Length

362 amino acids

Sequence
(BLAST)

001: MHRQMAAPVA AAVAWAPLLL VLLWAAGCAG QALVPGVMIF GDSVVDAGNN NRLATLVRAD FPPYGRDFPA THAPTGRFCN GKLATDYTVE SLGLSSYPPA
101: YLSEEAQSDN RTLLHGANFA SGAAGYLDAT AALYGAISLG RQLDYFKEYQ SKVAAVAGEK RAAALTSGSI YVVSAGTSDY VQNYYVNAML AAAYTPDQFA
201: DALMQPFTAF VERLYGLGAR RIGVTSLPPM GCLPASVTLF GGGGGGGCVE RLNNDSLTFN AKLQAASDAA KKRHSDLKLV VFDIYNPLLN LVADPMSAGF
301: FESRRACCGT GTIETSVLCH QGAPGTCANA TGYVFWDGFH PTDAANKVLA DALLLQGLQL IS

Best Arabidopsis Sequence Match ( AT5G03810.1 )
(BLAST)

001: MKMFITMSMC LSVIACFYAG VGTGETLVPA LIIMGDSVVD AGNNNHRITL VKANFPPYGR DFVAHSATGR FSNGKLATDF TAENLGFTSY PVAYLSQEAN
101: ETNLLTGANF ASGASGFDDA TAIFYNAITL SQQLKNYKEY QNKVTNIVGK ERANEIFSGA IHLLSTGSSD FLQSYYINPI LNRIFTPDQY SDHLLRSYST
201: FVQNLYGLGA RRIGVTTLPP LGCLPAAITL FGGVGNNMCV ERLNQDAVSF NTKLNNTSIN LTNNLPGLKL VVFDIYNPLL NMVINPVEYG FFESRRACCG
301: TGTMETSFLC NALSVGTCSN ATNYVFWDGF HPSEAANRVI ANNLLVQGIP LIS

Arabidopsis Description

GDSL esterase/lipase At5g03810 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFN0]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.