CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30531	Soybean	extracellular, vacuole	88.24	76.49
KRH26558	Soybean	endoplasmic reticulum, extracellular, vacuole	70.59	61.71
PGSC0003DMT400001233	Potato	extracellular, plasma membrane	65.69	56.94
Solyc11g066700.1.1	Tomato	extracellular, plasma membrane	65.03	56.06
Bra020216.1-P	Field mustard	extracellular	63.73	54.17
CDY50286	Canola	extracellular	63.73	54.17
AT5G22810.1	Thale cress	extracellular	63.4	54.04
CDY09169	Canola	endoplasmic reticulum, extracellular, plasma membrane	63.73	54.02
KRH22747	Soybean	mitochondrion	71.9	51.76
GSMUA_Achr4P17640_001	Banana	extracellular, plasma membrane	58.5	50.0
KRH23361	Soybean	nucleus	56.21	48.73
KRH47190	Soybean	nucleus	54.9	47.59
KRH09971	Soybean	nucleus	52.94	47.37
KRH44252	Soybean	nucleus	55.56	46.58
Os03t0683800-01	Rice	plastid	51.96	44.54
TraesCS4A01G285700.1	Wheat	endoplasmic reticulum, plasma membrane	50.65	43.91
EER93662	Sorghum	endoplasmic reticulum, plasma membrane	51.63	43.65
Zm00001d033522_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	50.98	43.45
TraesCS4D01G024900.1	Wheat	endoplasmic reticulum, plasma membrane	50.98	43.09
TraesCS4B01G027100.1	Wheat	endoplasmic reticulum, plasma membrane	50.65	42.58
HORVU4Hr1G004100.1	Barley	endoplasmic reticulum, plasma membrane	50.98	42.51
GSMUA_Achr2P12520_001	Banana	plastid	54.58	42.17
KRG89977	Soybean	cytosol	14.38	35.2
KRH61021	Soybean	mitochondrion	16.01	30.62
KRH05981	Soybean	extracellular	33.99	28.42
KRH17464	Soybean	extracellular	33.33	27.79
KRH72762	Soybean	cytosol	15.36	26.7

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	UniProt:A0A0R0H2T2	EMBL:ACUP02007211	InterPro:GDSL	EnsemblPlantsGene:GLYMA_12G083900
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0008374	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016787	GO:GO:0016788
InterPro:IPR036514	EnsemblPlants:KRH25150	ProteinID:KRH25150	ProteinID:KRH25150.1	PFAM:PF00657	PANTHER:PTHR22835
PANTHER:PTHR22835:SF288	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SignalP:SignalP-noTM	UniParc:UPI0006EDE525	SEG:seg

Description

hypothetical protein

Coordinates

chr12:-:6695874..6697458

Molecular Weight (calculated)

33945.0 Da

IEP (calculated)

8.349

GRAVY (calculated)

0.052

Length

306 amino acids

Sequence
(BLAST)

001: MGYSRSFLAS LLLAVFLNVT NGQPLVPAMF TFGDSIVDVG NNNHQLTIVK ANFPPYGRDF ENQYRTGRFC NGKLATDFIA EIIGFTSYQP AYLNLKTKGK
101: NLLNGANLPQ LLLNSIPLSK QLEYYKECQT KLSIISDAIY LISAGTSDFV QNYYINPLLS KLYTTDQFSD ILLRCYSSFI QSLYALGARR IGVTTLPPIG
201: YLPGAITLFG AHTNECVTSL NSDAINFNEK INTTSQNLKN MLPGLNLVVF DIYQPLYDLV TKPSENGFFE ARKACCGTGL IETLCNKKSI GTCDHTYLKI
301: VIVKYG

Best Arabidopsis Sequence Match ( AT3G16370.1 )
(BLAST)

001: MDRCTSSFLL LTLVSTLSIL QISFAQLVPA IMTFGDSVVD VGNNNYLPTL FRADYPPYGR DFANHKATGR FCNGKLATDI TAETLGFTKY PPAYLSPEAS
101: GKNLLIGANF ASAASGYDDK AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIIKGA ICLLSAGSSD FVQNYYVNPL LYKVYTVDAY GSFLIDNFST
201: FIKQVYAVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVS RLNTDAQNFN KKLNAAASKL QKQYSDLKIV VFDIYSPLYD LVQNPSKSGF TEATKGCCGT
301: GTVETTSLLC NPKSFGTCSN ATQYVFWDSV HPSEAANEIL ATALIGQGFS LLG

Arabidopsis Description

APGGDSL esterase/lipase APG [Source:UniProtKB/Swiss-Prot;Acc:Q9LU14]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.