CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85927	Canola	extracellular, mitochondrion, plastid	45.0	52.17
Zm00001d044521_P001	Maize	cytosol, mitochondrion	35.0	40.88
Zm00001d024117_P001	Maize	cytosol, mitochondrion	35.0	40.88
TraesCS7D01G346800.1	Wheat	cytosol, extracellular, mitochondrion	33.75	38.57
PGSC0003DMT400076811	Potato	cytosol	50.0	37.74
KRH72762	Soybean	cytosol	23.12	21.02
KRH30531	Soybean	extracellular, vacuole	38.75	17.56
KRH47190	Soybean	nucleus	38.75	17.56
KRH23361	Soybean	nucleus	38.12	17.28
KRH09971	Soybean	nucleus	36.88	17.25
KRH05981	Soybean	extracellular	38.75	16.94
KRH26558	Soybean	endoplasmic reticulum, extracellular, vacuole	36.88	16.86
KRH44252	Soybean	nucleus	38.12	16.71
KRH17464	Soybean	extracellular	38.12	16.62
KRH25150	Soybean	extracellular	30.62	16.01
KRH22747	Soybean	mitochondrion	36.88	13.88
HORVU1Hr1G065930.2	Barley	mitochondrion	26.88	10.8
KRG89977	Soybean	cytosol	4.38	5.6
VIT_09s0002g03050.t01	Wine grape	extracellular	0.62	0.95
Os06t0148600-01	Rice	cytosol, golgi, nucleus, plastid	0.0	0.0

Protein Annotations

EMBL:ACUP02002145	EnsemblPlants:KRH61021	EnsemblPlantsGene:GLYMA_04G023000	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	PANTHER:PTHR22835
PANTHER:PTHR22835:SF471	PFAM:PF00657	ProteinID:KRH61021	ProteinID:KRH61021.1	UniParc:UPI000296D878	UniProt:K7KHQ5
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:1815099..1816361

Molecular Weight (calculated)

18015.9 Da

IEP (calculated)

9.032

GRAVY (calculated)

-0.040

Length

160 amino acids

Sequence
(BLAST)

001: MVRSASNFLK EIYQLGARRV GVFSAPPIGC VPFQRTLFGG IVRKCAEKYN DAAKLFNNKL ANELASLNRN VPNSRMVYVN LDVCNPLLDI IVNYQNYGFK
101: VGDRGCCGTG KIEAAVLCNP LHPTCPDVGD YVFWDSFHPS ENVYRKLVAP ILRKYLYQFL

Best Arabidopsis Sequence Match ( AT1G75880.1 )
(BLAST)

001: MERCRSGHHR IISYYLSSSL ILFWCIFVLV LLSTTSTTNA LVKIPKNTTV PAVIVFGDSI VDAGNNDDMI TEARCDYAPY GIDFDGGVAT GRFSNGKVPG
101: DIVAEELGIK PNIPAYRNPN LKPEELLTGV TFASGGAGYV PLTTKIAVGG IPLPQQLIYF EEYIEKLKQM VGEKRTKFII KNSLFVVICG SNDIANDFFT
201: LPPVRLHYTV ASFTALMADN ARSFAQTLYG YGARRILVFG APPIGCVPSQ RTVAGGPTRD CVARFNDAAK LFNTKLSANI DVLSRTLQDP TIIYIDIYSP
301: LLDLILNPHQ YGFKVANKGC CGTGLIEVTA LCNNYTASVC PIRSDYVFWD SFHPTEKAYR IIVAKLLDRY LNRFF

Arabidopsis Description

EXL1GDSL esterase/lipase EXL1 [Source:UniProtKB/Swiss-Prot;Acc:Q94CH8]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.