Factsheet for Bra028818.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04898	Canola	extracellular, plasma membrane	98.57	98.57
Bra005781.1-P	Field mustard	plastid	51.14	85.65
Bra005782.1-P	Field mustard	extracellular, plasma membrane	84.86	84.14
AT5G03810.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	83.43	82.72
AT5G03820.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	85.43	77.66
GSMUA_Achr4P17640_001	Banana	extracellular, plasma membrane	63.71	62.29
Bra040686.1-P	Field mustard	extracellular, plasma membrane	58.57	58.4
Bra020216.1-P	Field mustard	extracellular	59.43	57.78
TraesCS4A01G285700.1	Wheat	endoplasmic reticulum, plasma membrane	57.71	57.22
Os03t0683800-01	Rice	plastid	58.0	56.86
TraesCS4D01G024900.1	Wheat	endoplasmic reticulum, plasma membrane	57.71	55.8
HORVU4Hr1G004100.1	Barley	endoplasmic reticulum, plasma membrane	58.29	55.59
TraesCS4B01G027100.1	Wheat	endoplasmic reticulum, plasma membrane	57.71	55.49
Zm00001d033522_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	56.86	55.43
EER93662	Sorghum	endoplasmic reticulum, plasma membrane	57.14	55.25
Bra027168.1-P	Field mustard	extracellular	55.43	54.8
GSMUA_Achr2P12520_001	Banana	plastid	58.29	51.52
Bra029234.1-P	Field mustard	plasma membrane	34.57	35.8
Bra012377.1-P	Field mustard	extracellular	34.57	35.48
Bra024605.1-P	Field mustard	extracellular	33.71	35.01
Bra008229.1-P	Field mustard	extracellular, plasma membrane	30.29	31.09
Bra014533.1-P	Field mustard	cytosol, mitochondrion	16.29	28.64

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	EnsemblPlantsGene:Bra028818	EnsemblPlants:Bra028818.1	EnsemblPlants:Bra028818.1-P	InterPro:GDSL
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016298
GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514	InterPro:Lipase_GDSL_AS	UniProt:M4EJ52	PFAM:PF00657
ScanProsite:PS01098	PANTHER:PTHR22835	PANTHER:PTHR22835:SF146	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266
SignalP:SignalP-noTM	UniParc:UPI0002543033	:	:	:	:

Description

AT5G03820 (E=9e-173) | GDSL-motif lipase/hydrolase family protein

Coordinates

chrA02:-:1924342..1925964

Molecular Weight (calculated)

38105.7 Da

IEP (calculated)

8.719

GRAVY (calculated)

0.115

Length

350 amino acids

Sequence
(BLAST)

001: MFIRLISFLV LAGFYVGVGT GQPLVPALII IGDSVVDAGN NNHRTTLIKA NFPPYGRDFF AHNSTGRFSN GKLVIDFTAE SLGFTSYPVA YLSQDANGTN
101: LLTGANFASG ASGFDDGTSL LYNAITLNQQ LKNYKEYKIK VTNMVGRDRA NEIFSGAIYL LSTGSSDFLQ SYYINPILNR IFTPDRYSDR LMNFYSTFVH
201: NLYNLGARRI GVTTLPPLGC LPAAITMFGG AGNNTCVERL NRDAVSFNTK LNNTSMYLAN KLPGLKLVVL DIYNPLLSMV MNPVANGFFE SRRACCGTGT
301: METSFLCNAR SVGTCSNATN YVFWDGFHPS EAANRVLAAS LLVQGISLIS

Best Arabidopsis Sequence Match ( AT5G03820.1 )
(BLAST)

001: MNKMKMFIIM LMTFSVIACF YAGVGTGEPL VPALIIMGDS VVDAGNNNRL NTLIKANFPP YGRDFLAHNA TGRFSNGKLA TDFTAESLGF TSYPVPYLSQ
101: EANGTNLLTG ANFASGASGY DDGTAIFYNA ITLNQQLKNY KEYQNKVTNI VGSERANKIF SGAIHLLSTG SSDFLQSYYI NPILNRIFTP DQYSDRLMKP
201: YSTFVQNLYD LGARKIGVTT LPPLGCLPAA ITLFGETGNN NTCVERLNQD AVSFNTKLNN TSMNLTNNLP GLKLVVFDIY NPLLNMAMNP VENGFFESRR
301: ACCGTGTVET SFLCNARSVG TCSNATNYVF WDGFHPSEAA NRVIANNLLV QGIPLIS

Arabidopsis Description

GDSL-like Lipase/Acylhydrolase family protein [Source:TAIR;Acc:AT5G03820]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.