Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72994 | Canola | extracellular | 97.05 | 97.05 |
| AT1G73610.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 78.76 | 77.62 |
| CDY25788 | Canola | extracellular | 65.19 | 64.81 |
| CDY04705 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 67.26 | 64.23 |
| CDY44153 | Canola | cytosol | 66.08 | 63.64 |
| CDY54289 | Canola | extracellular | 59.29 | 58.43 |
| CDY45740 | Canola | plasma membrane | 55.16 | 55.33 |
| CDY30744 | Canola | extracellular | 55.16 | 55.33 |
| CDY43409 | Canola | extracellular, plasma membrane | 53.69 | 53.53 |
| CDY45771 | Canola | extracellular, plasma membrane | 46.31 | 46.04 |
| CDY67583 | Canola | extracellular | 46.31 | 45.77 |
| CDY67584 | Canola | extracellular, plasma membrane | 46.02 | 45.75 |
| CDY13524 | Canola | extracellular, plasma membrane | 46.02 | 45.75 |
| CDY39069 | Canola | extracellular, plasma membrane | 46.02 | 45.75 |
| CDX89030 | Canola | plasma membrane | 39.23 | 44.33 |
| KRH05981 | Soybean | extracellular | 47.79 | 44.26 |
| CDY39070 | Canola | extracellular | 19.17 | 43.92 |
| KRH17464 | Soybean | extracellular | 46.9 | 43.32 |
| CDY57589 | Canola | plasma membrane | 54.28 | 39.4 |
| CDY13523 | Canola | golgi, plasma membrane, plastid | 38.94 | 38.04 |
| VIT_09s0002g03050.t01 | Wine grape | extracellular | 10.91 | 35.24 |
| CDX85927 | Canola | extracellular, mitochondrion, plastid | 13.86 | 34.06 |
| CDY14175 | Canola | extracellular, plasma membrane | 32.15 | 33.33 |
| CDY30167 | Canola | extracellular | 33.92 | 32.49 |
| CDY56196 | Canola | vacuole | 33.92 | 32.12 |
| CDX80889 | Canola | extracellular, plasma membrane | 33.33 | 32.01 |
| CDY15393 | Canola | cytosol | 20.65 | 31.82 |
| CDY04898 | Canola | extracellular, plasma membrane | 32.74 | 31.71 |
| CDX95394 | Canola | extracellular | 32.74 | 31.62 |
| CDX76226 | Canola | extracellular, plasma membrane | 32.74 | 31.62 |
| CDY11271 | Canola | extracellular, plasma membrane | 33.33 | 30.79 |
| CDY09169 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.45 | 30.47 |
| CDY50286 | Canola | extracellular | 32.15 | 30.28 |
| CDY54290 | Canola | extracellular | 25.07 | 28.24 |
| CDY15394 | Canola | extracellular | 9.44 | 26.23 |
| CDX75880 | Canola | vacuole | 19.47 | 21.29 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | GO:A0A078E5C7 | EnsemblPlants:CDX96486 | ProteinID:CDX96486 | ProteinID:CDX96486.1 |
| InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016298 | GO:GO:0016787 | GO:GO:0016788 | EnsemblPlantsGene:GSBRNA2T00102662001 | InterPro:IPR036514 | InterPro:Lipase_GDSL_AS |
| PFAM:PF00657 | ScanProsite:PS01098 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF330 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like |
| SUPFAM:SSF52266 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EEC7B9 | : | : |
Description
BnaA07g30970D
Coordinates
chrLK031894:+:1048267..1049759
Molecular Weight (calculated)
36779.6 Da
IEP (calculated)
5.946
GRAVY (calculated)
0.235
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSKMLVAFV FTCLFYVGSA QQLTVSALFA FGDSILDTGN NNLLATLTKV NFFPYGRDLG GLPTGRFGNG RVVSDMIAEG LGLKNLLPAY RNPALSSNDL
101: VTGVCFASGG SGLDSITAMM QGVIWVQDQV RDFQNYITRL NGVVGSQEKT NEIISNAVYL ISAGNNDIAI TYFTTVTRRL QYTLPAYTDL LVTWTRDLIK
201: SLYDMGARKF AVMGTLPLGC LPGARSSIAN LFKVCEVFSN QAAAMFNQKL SAELDNLGAA FPGAKFMYID MYNPLMGLIN NPQASGFIDA ADGCCCTPMS
301: IMPCLDASSY VFWDIAHPTQ KSYQTITPNI IQDIKAKLA
101: VTGVCFASGG SGLDSITAMM QGVIWVQDQV RDFQNYITRL NGVVGSQEKT NEIISNAVYL ISAGNNDIAI TYFTTVTRRL QYTLPAYTDL LVTWTRDLIK
201: SLYDMGARKF AVMGTLPLGC LPGARSSIAN LFKVCEVFSN QAAAMFNQKL SAELDNLGAA FPGAKFMYID MYNPLMGLIN NPQASGFIDA ADGCCCTPMS
301: IMPCLDASSY VFWDIAHPTQ KSYQTITPNI IQDIKAKLA
001: MNCLMFFKML LAFSFISLFY VGNAQQSYGN STVSALFAFG DSILDTGNNN LLLSVSKVNF YPYGRDFIGG RATGRFGNGR VFSDIIAEGL GLKNLLPAYR
101: DPYLWNNDLT TGVCFASGGS GLDPITARTT GSIWVSDQVT DFQNYITRLN GVVGNQEQAN AVISNAVYLI SAGNNDIAIT YFTTGARRLQ YTLPAYNDQL
201: VSWTRDLIKS LYDMGARKFA VMGTLPLGCL PGARALTRAC ELFVNQGAAM FNQQLSADID NLGATFPGAK FVYVDMYNPL LGLIINPQAS GFIDVADACC
301: CTPTHLIPCL DASRYVFWDV AHPTQKSYET IAPQIIENIK AKLA
101: DPYLWNNDLT TGVCFASGGS GLDPITARTT GSIWVSDQVT DFQNYITRLN GVVGNQEQAN AVISNAVYLI SAGNNDIAIT YFTTGARRLQ YTLPAYNDQL
201: VSWTRDLIKS LYDMGARKFA VMGTLPLGCL PGARALTRAC ELFVNQGAAM FNQQLSADID NLGATFPGAK FVYVDMYNPL LGLIINPQAS GFIDVADACC
301: CTPTHLIPCL DASRYVFWDV AHPTQKSYET IAPQIIENIK AKLA
Arabidopsis Description
GDSL esterase/lipase At1g73610 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9V0]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.