CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU92006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G16370.1	OQU92006	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011661_P001	Maize	extracellular	89.17	89.92
Os06t0148200-01	Rice	extracellular	81.94	84.05
TraesCS4A01G397000.1	Wheat	extracellular	77.78	79.77
TraesCS7D01G093200.1	Wheat	extracellular	77.78	79.77
TraesCS7A01G097100.1	Wheat	golgi	77.22	79.2
GSMUA_Achr7P08930_001	Banana	endoplasmic reticulum, extracellular	71.67	71.87
GSMUA_Achr2P16800_001	Banana	extracellular, vacuole	71.39	71.79
HORVU7Hr1G021310.7	Barley	extracellular	77.78	71.07
HORVU7Hr1G021630.2	Barley	cytosol, plastid	51.67	68.63
TraesCS4A01G398600.1	Wheat	extracellular	66.67	67.99
VIT_09s0002g03140.t01	Wine grape	extracellular	66.67	67.42
HORVU7Hr1G021460.4	Barley	extracellular	65.83	67.33
KRH47190	Soybean	nucleus	64.72	66.01
TraesCS7D01G094500.1	Wheat	extracellular	64.72	66.01
TraesCS7A01G099900.1	Wheat	extracellular, golgi, plasma membrane	65.28	65.46
Solyc03g121180.2.1	Tomato	nucleus	65.28	65.46
TraesCS4A01G397900.1	Wheat	extracellular	64.17	65.25
TraesCS4A01G398500.1	Wheat	plasma membrane	63.89	65.16
TraesCS7D01G094000.1	Wheat	extracellular	63.33	64.96
PGSC0003DMT400006459	Potato	extracellular	64.72	64.9
HORVU7Hr1G021580.1	Barley	extracellular	63.61	64.87
AT3G16370.1	Thale cress	endoplasmic reticulum, vacuole	63.61	64.87
KRH23361	Soybean	nucleus	63.06	64.31
KRH44252	Soybean	nucleus	64.72	63.84
TraesCS4A01G398700.1	Wheat	extracellular	63.33	63.69
Bra027168.1-P	Field mustard	extracellular	61.94	62.99
CDY56196	Canola	vacuole	62.22	62.57
CDY30167	Canola	extracellular	61.39	62.43
KRH09971	Soybean	nucleus	59.17	62.28
HORVU2Hr1G002340.1	Barley	cytosol, plastid	44.44	62.02
PGSC0003DMT400006461	Potato	extracellular	60.28	60.45
EER87852	Sorghum	extracellular	57.22	57.06
TraesCS7A01G100200.1	Wheat	extracellular	52.78	56.21
VIT_09s0002g03150.t01	Wine grape	extracellular	54.44	55.21
EER93662	Sorghum	endoplasmic reticulum, plasma membrane	55.0	54.7
Solyc03g121170.2.1	Tomato	nucleus	60.56	52.28
CDX75880	Canola	vacuole	34.17	39.68

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	EntrezGene:8071308	UniProt:C5Z3Y9	EnsemblPlants:EER87840	ProteinID:EER87840
ProteinID:EER87840.1	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787	GO:GO:0016788
InterPro:IPR036514	PFAM:PF00657	PANTHER:PTHR22835	PANTHER:PTHR22835:SF134	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
EnsemblPlantsGene:SORBI_3010G037600	SUPFAM:SSF52266	unigene:Sbi.8159	SignalP:SignalP-noTM	UniParc:UPI0001A88F91	RefSeq:XP_002436473.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:3004743..3008768

Molecular Weight (calculated)

38735.1 Da

IEP (calculated)

6.925

GRAVY (calculated)

0.068

Length

360 amino acids

Sequence
(BLAST)

001: MMALQAQQGR WMSSLVLAIF FLAGVPRGGE AQPLVPAVLT FGDSTVDVGN NDYLHTILKA NFPPYGRDFA NHVATGRFCN GKLATDITAD TLGFTTYPAA
101: YLSPQASGQN LLIGANFASA GSGYYDHTAL MYHAIPLSQQ LEYFKEYQSK LAAVAGAGQA HSIITGALYI ISAGASDFVQ NYYINPFLYK TQTADQFSDR
201: LVRIFHNTVS QLYGMGARRI GVTSLPPLGC LPAAITLFGH GSNGCVSRLN ADSQSFNRKM NATVDALSRR YPDLKIAVFD IYTPLYDLAT DPRSQGFTEA
301: RRGCCGTGTV ETTVLLCNPK SVGTCPNATS YVFWDAVHPS EAANQVIADS LITEGLILVT

Best Arabidopsis Sequence Match ( AT3G16370.1 )
(BLAST)

001: MDRCTSSFLL LTLVSTLSIL QISFAQLVPA IMTFGDSVVD VGNNNYLPTL FRADYPPYGR DFANHKATGR FCNGKLATDI TAETLGFTKY PPAYLSPEAS
101: GKNLLIGANF ASAASGYDDK AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIIKGA ICLLSAGSSD FVQNYYVNPL LYKVYTVDAY GSFLIDNFST
201: FIKQVYAVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVS RLNTDAQNFN KKLNAAASKL QKQYSDLKIV VFDIYSPLYD LVQNPSKSGF TEATKGCCGT
301: GTVETTSLLC NPKSFGTCSN ATQYVFWDSV HPSEAANEIL ATALIGQGFS LLG

Arabidopsis Description

APGGDSL esterase/lipase APG [Source:UniProtKB/Swiss-Prot;Acc:Q9LU14]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.