Factsheet for TraesCS7A01G099900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G16370.1	TraesCS3A01G099400.1	AT2G01950.1	19000166
AT3G16370.1	TraesCS3B01G115800.1	AT2G01950.1	19000166
AT3G16370.1	TraesCS3D01G099700.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G398500.1	Wheat	plasma membrane	89.97	91.5
HORVU2Hr1G002340.1	Barley	cytosol, plastid	56.82	79.07
Os06t0148200-01	Rice	extracellular	66.57	68.09
TraesCS4A01G398600.1	Wheat	extracellular	66.02	67.14
TraesCS4A01G397900.1	Wheat	extracellular	65.74	66.67
TraesCS4A01G398700.1	Wheat	extracellular	65.46	65.64
EER87840	Sorghum	extracellular, vacuole	65.46	65.28
TraesCS4A01G397000.1	Wheat	extracellular	63.79	65.24
TraesCS7A01G097100.1	Wheat	golgi	63.51	64.96
Zm00001d011661_P001	Maize	extracellular	64.07	64.43
GSMUA_Achr2P16800_001	Banana	extracellular, vacuole	59.05	59.22
TraesCS7A01G100200.1	Wheat	extracellular	55.71	59.17
GSMUA_Achr7P08930_001	Banana	endoplasmic reticulum, extracellular	58.77	58.77
VIT_09s0002g03140.t01	Wine grape	extracellular	54.32	54.78
KRH47190	Soybean	nucleus	53.48	54.39
KRH23361	Soybean	nucleus	52.37	53.26
Solyc03g121180.2.1	Tomato	nucleus	52.92	52.92
Bra027168.1-P	Field mustard	extracellular	51.81	52.54
PGSC0003DMT400006459	Potato	extracellular	52.37	52.37
CDY30167	Canola	extracellular	51.53	52.26
AT3G16370.1	Thale cress	endoplasmic reticulum, vacuole	51.25	52.12
CDY56196	Canola	vacuole	51.81	51.96
KRH44252	Soybean	nucleus	52.37	51.51
KRH09971	Soybean	nucleus	47.91	50.29
TraesCS4A01G285700.1	Wheat	endoplasmic reticulum, plasma membrane	47.35	48.16
PGSC0003DMT400006461	Potato	extracellular	47.91	47.91
TraesCS4A01G399300.1	Wheat	endoplasmic reticulum	47.91	47.51
TraesCS7A01G100600.1	Wheat	endoplasmic reticulum, golgi	47.63	46.72
VIT_09s0002g03150.t01	Wine grape	extracellular	45.68	46.2
Solyc03g121170.2.1	Tomato	nucleus	48.47	41.73
CDX75880	Canola	vacuole	26.46	30.65

Protein Annotations

EnsemblPlants:TraesCS7A01G099900.1	EnsemblPlantsGene:TraesCS7A01G099900	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835
PANTHER:PTHR22835:SF134	PFAM:PF00657	SignalP:SignalP-noTM	SUPFAM:SSF52266	TIGR:cd01837	MapMan:35.1

Description

No Description!

Coordinates

chr7A:+:61433925..61435547

Molecular Weight (calculated)

39055.7 Da

IEP (calculated)

7.554

GRAVY (calculated)

0.081

Length

359 amino acids

Sequence
(BLAST)

001: MFWTTPKAVR FLVFLAIFLF VEPTTDGREA QPAVPGVMLF GDSLVGVGNN DYLATLVKAN MAPYGRDFKD HIATGRFGNG KLLSDIIGEK LGFNGSPPAY
101: LSPQASGQNL LIGANFASAG SGYYDPTARI YHVIPLSRQL EYLKEYQSKL RVVAGNDHAQ SIISDSLYII SAGSNDFGFN YYINPLLFLT QNADQFSDRL
201: VGIFNNTVTQ LHAMGARRVG VFSLAPLGCA PLAITVFGLR RNRCVPRLND DAQRFNGKLS AAVDSLSNRY QDLKVAVLDI YTPWHSLATS PVSHGFAEAR
301: HGCCATGLVE FTVFLCNSLS IGTCPNATTY VHWDSIHPSE AANRVIVDSL GEGINKLVM

Best Arabidopsis Sequence Match ( AT3G16370.1 )
(BLAST)

001: MDRCTSSFLL LTLVSTLSIL QISFAQLVPA IMTFGDSVVD VGNNNYLPTL FRADYPPYGR DFANHKATGR FCNGKLATDI TAETLGFTKY PPAYLSPEAS
101: GKNLLIGANF ASAASGYDDK AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIIKGA ICLLSAGSSD FVQNYYVNPL LYKVYTVDAY GSFLIDNFST
201: FIKQVYAVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVS RLNTDAQNFN KKLNAAASKL QKQYSDLKIV VFDIYSPLYD LVQNPSKSGF TEATKGCCGT
301: GTVETTSLLC NPKSFGTCSN ATQYVFWDSV HPSEAANEIL ATALIGQGFS LLG

Arabidopsis Description

APGGDSL esterase/lipase APG [Source:UniProtKB/Swiss-Prot;Acc:Q9LU14]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.