Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 4
- mitochondrion 3
- peroxisome 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g009960.2.1 | Tomato | plastid | 66.67 | 23.92 |
| Solyc06g059720.2.1 | Tomato | plastid | 75.93 | 21.19 |
| Solyc06g059710.2.1 | Tomato | plastid | 74.07 | 20.67 |
| Solyc06g054670.1.1 | Tomato | plastid | 64.81 | 18.47 |
| Solyc11g008680.1.1 | Tomato | plastid | 62.96 | 17.3 |
| Solyc06g053480.2.1 | Tomato | plastid | 62.96 | 17.13 |
| Solyc03g063110.2.1 | Tomato | plastid | 62.04 | 17.05 |
| Solyc06g059700.2.1 | Tomato | cytosol | 2.78 | 2.11 |
Protein Annotations
| Gene3D:1.10.620.20 | MapMan:5.1.7.1 | InterPro:Fatty_acid_desaturase-2 | InterPro:Ferritin-like_SF | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006629 | GO:GO:0006631 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 |
| GO:GO:0045300 | GO:GO:0055114 | InterPro:IPR012348 | UniProt:K4C4P1 | PFAM:PF03405 | PANTHER:PTHR31155 |
| PANTHER:PTHR31155:SF3 | InterPro:RNR-like | SUPFAM:SSF47240 | EnsemblPlantsGene:Solyc06g034170.1 | EnsemblPlants:Solyc06g034170.1.1 | UniParc:UPI0002765B4A |
Description
No Description!
Coordinates
chr6:+:23771302..23771628
Molecular Weight (calculated)
12117.7 Da
IEP (calculated)
8.767
GRAVY (calculated)
-0.381
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFVYTSFQE RATFITHGNM ARLAKKSGGP VLARICGTVA ADEKRHENAY TRIIEKLLEV DPNTTIEAIA SMMRKRITMP LHHMNDGQDP NLLDHFSKTG
101: HLHNSPLC
101: HLHNSPLC
001: MLAHKSLLSF TTQWATLMPS PSTFLASRPR GPAKISAVAA PVRPALKHQN KIHTMPPEKM EIFKSLDGWA KDQILPLLKP VDQCWQPASF LPDPALPFSE
101: FTDQVRELRE RTASLPDEYF VVLVGDMITE DALPTYQTMI NTLDGVRDET GASESAWASW TRAWTAEENR HGDLLRTYLY LSGRVDMLMV ERTVQHLIGS
201: GMDPGTENNP YLGFVYTSFQ ERATFVSHGN TARLAKSAGD PVLARICGTI AADEKRHENA YVRIVEKLLE IDPNGAVSAV ADMMRKKITM PAHLMTDGRD
301: PMLFEHFSAV AQRLEVYTAD DYADILEFLV GRWRLEKLEG LTGEGQRAQE FVCGLAQRIR RLQERADERA KKLKKTHEVC FSWIFDKQIS V
101: FTDQVRELRE RTASLPDEYF VVLVGDMITE DALPTYQTMI NTLDGVRDET GASESAWASW TRAWTAEENR HGDLLRTYLY LSGRVDMLMV ERTVQHLIGS
201: GMDPGTENNP YLGFVYTSFQ ERATFVSHGN TARLAKSAGD PVLARICGTI AADEKRHENA YVRIVEKLLE IDPNGAVSAV ADMMRKKITM PAHLMTDGRD
301: PMLFEHFSAV AQRLEVYTAD DYADILEFLV GRWRLEKLEG LTGEGQRAQE FVCGLAQRIR RLQERADERA KKLKKTHEVC FSWIFDKQIS V
Arabidopsis Description
S-ACP-DES6Stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84VY3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.