Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400029280 | Potato | cytosol | 86.51 | 74.18 |
| Solyc02g080120.1.1 | Tomato | cytosol, mitochondrion, nucleus, peroxisome | 67.47 | 51.32 |
| VIT_10s0116g00410.t01 | Wine grape | cytosol, nucleus, peroxisome | 59.17 | 49.71 |
| GSMUA_Achr9P11880_001 | Banana | cytosol, nucleus, peroxisome | 46.71 | 41.41 |
| Solyc04g008670.1.1 | Tomato | golgi | 47.4 | 38.38 |
| GSMUA_Achr6P21950_001 | Banana | cytosol, nucleus, peroxisome | 46.02 | 38.33 |
| GSMUA_Achr8P03660_001 | Banana | endoplasmic reticulum, golgi | 43.25 | 29.9 |
| Solyc06g082030.2.1 | Tomato | cytosol | 28.37 | 23.23 |
| Solyc03g025490.2.1 | Tomato | plastid | 23.53 | 21.25 |
| Solyc01g094590.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 15.22 | 20.28 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | ncoils:Coil | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 |
| InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | UniProt:K4CX69 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 |
| PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF386 | SUPFAM:SSF51197 | EnsemblPlantsGene:Solyc10g005360.2 |
| EnsemblPlants:Solyc10g005360.2.1 | UniParc:UPI000276C75B | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr10:-:261366..264169
Molecular Weight (calculated)
33309.6 Da
IEP (calculated)
4.842
GRAVY (calculated)
-0.206
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MEESPDPPFV ETYKNLIDTN IVDDEHIDLF MVEECELPLI NLHQLNYGNK FEREECKKKI AKASREWGFF QVVNHGVSPN ILGQMRTEQV KLFKKTFNEK
101: INIDKSLNFS EGSYRWGTPT ATCLRQISWS EAFHVPLSDV SKGFSSLSFT MEEFATTLSE LAQELARLLA EELGDYYNYK LDYFKETCLS STCYLRMNRY
201: PACPISPQLF GLMPHTDSDF LTILHQDEIG GLQLFSDGKW ISVKPNPEAL IINIGDLFQV FRSFSYTISS IITFHCNHLI SFVNTFFSC
101: INIDKSLNFS EGSYRWGTPT ATCLRQISWS EAFHVPLSDV SKGFSSLSFT MEEFATTLSE LAQELARLLA EELGDYYNYK LDYFKETCLS STCYLRMNRY
201: PACPISPQLF GLMPHTDSDF LTILHQDEIG GLQLFSDGKW ISVKPNPEAL IINIGDLFQV FRSFSYTISS IITFHCNHLI SFVNTFFSC
001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY
Arabidopsis Description
GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.