Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P11880_001 | Banana | cytosol, nucleus, peroxisome | 72.91 | 77.61 |
| CDX76423 | Canola | cytosol, peroxisome, plastid | 32.28 | 60.87 |
| CDY47108 | Canola | cytosol, peroxisome, plastid | 32.28 | 60.87 |
| GSMUA_Achr8P03660_001 | Banana | endoplasmic reticulum, golgi | 72.91 | 60.53 |
| KRH27598 | Soybean | cytosol, nucleus, peroxisome | 52.45 | 53.69 |
| Bra020890.1-P | Field mustard | cytosol, nucleus, peroxisome | 50.43 | 51.78 |
| PGSC0003DMT400029280 | Potato | cytosol | 49.57 | 51.04 |
| AT4G21200.1 | Thale cress | cytosol, nucleus, peroxisome | 49.57 | 50.89 |
| CDX94029 | Canola | cytosol | 49.28 | 50.59 |
| CDX79045 | Canola | cytosol, nucleus, peroxisome | 49.28 | 50.59 |
| Bra038780.1-P | Field mustard | cytosol | 49.28 | 50.59 |
| CDX82811 | Canola | cytosol, nucleus, peroxisome | 48.99 | 50.3 |
| VIT_10s0116g00410.t01 | Wine grape | cytosol, nucleus, peroxisome | 49.86 | 50.29 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, peroxisome | 49.86 | 50.29 |
| KRH22245 | Soybean | cytosol, nucleus, peroxisome | 45.24 | 49.22 |
| GSMUA_Achr9P21260_001 | Banana | cytosol | 46.69 | 48.94 |
| KRH57748 | Soybean | cytosol, nucleus, peroxisome | 45.24 | 48.16 |
| KRH22241 | Soybean | cytosol, nucleus, peroxisome | 46.69 | 48.07 |
| KRH57481 | Soybean | cytosol | 10.37 | 48.0 |
| KRH27091 | Soybean | cytosol | 44.67 | 47.99 |
| VIT_19s0177g00030.t01 | Wine grape | vacuole | 50.72 | 47.96 |
| KRG91226 | Soybean | cytosol, nucleus, peroxisome | 50.14 | 47.54 |
| KRH27095 | Soybean | cytosol, nucleus, peroxisome | 45.53 | 46.75 |
| Solyc10g005360.2.1 | Tomato | cytosol | 38.33 | 46.02 |
| PGSC0003DMT400005250 | Potato | cytosol, nucleus, peroxisome | 47.55 | 45.96 |
| VIT_19s0177g00020.t01 | Wine grape | plastid | 29.39 | 45.74 |
| KRH04189 | Soybean | cytosol, nucleus, peroxisome | 45.82 | 45.69 |
| KRH04670 | Soybean | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 44.67 | 44.8 |
| Bra013512.1-P | Field mustard | cytosol | 31.99 | 44.22 |
| CDY35579 | Canola | cytosol, nucleus, peroxisome | 31.12 | 43.37 |
| Solyc02g080120.1.1 | Tomato | cytosol, mitochondrion, nucleus, peroxisome | 47.26 | 43.16 |
| AT1G50960.1 | Thale cress | plastid | 40.06 | 41.37 |
| CDY47111 | Canola | cytosol | 18.44 | 39.51 |
| CDY71106 | Canola | cytosol | 18.44 | 39.02 |
| GSMUA_Achr10P... | Banana | mitochondrion | 32.28 | 31.11 |
| GSMUA_Achr1P03100_001 | Banana | cytosol | 28.24 | 30.82 |
| CDY35580 | Canola | plastid | 4.9 | 26.56 |
| CDY29619 | Canola | plastid | 37.18 | 17.55 |
| Bra030461.1-P | Field mustard | plastid | 37.18 | 17.15 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | ncoils:Coil | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 |
| EnsemblPlantsGene:GSMUA_Achr6G21950_001 | EnsemblPlants:GSMUA_Achr6P21950_001 | EnsemblPlants:GSMUA_Achr6T21950_001 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 |
| UniProt:M0T943 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 |
| PANTHER:PTHR10209:SF386 | SUPFAM:SSF51197 | UniParc:UPI000294E1F5 | : | : | : |
Description
Gibberellin 2-beta-dioxygenase 8 [Source:GMGC_GENE;Acc:GSMUA_Achr6G21950_001]
Coordinates
chr6:+:18633392..18636939
Molecular Weight (calculated)
39004.7 Da
IEP (calculated)
8.318
GRAVY (calculated)
-0.200
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIMRIVSEA KELDQAAVDH SATVMDSNPP FVATYKSLFS SRASMNHEAE LLAVECDLPL VDLSRLNSKL EAKQCKQDII TAATEWGFFQ IVNHGVSNSL
101: LARLRRQQVK MFRQPFKKKV LDFSDDSYRW GTPTATSLKQ LSWSEAYHIP VSSANKLART STNRCVIEEF SAAMAQLANQ LVDTLAEGLG RDGTYIKENC
201: TRNSCYLRLN HYPSCPLPGE VFGLVPHTDS DFLTILCQDT VCGLQLNKAG RWVTVKPNPN ALIVNIGDLF QAWSNGLYKS VEHRVMSNPH LERFSVAYFV
301: CPSKETLIQS SALPAIYRKF SFGEYRLQVQ QDVRLTGHKV GLTRFLA
101: LARLRRQQVK MFRQPFKKKV LDFSDDSYRW GTPTATSLKQ LSWSEAYHIP VSSANKLART STNRCVIEEF SAAMAQLANQ LVDTLAEGLG RDGTYIKENC
201: TRNSCYLRLN HYPSCPLPGE VFGLVPHTDS DFLTILCQDT VCGLQLNKAG RWVTVKPNPN ALIVNIGDLF QAWSNGLYKS VEHRVMSNPH LERFSVAYFV
301: CPSKETLIQS SALPAIYRKF SFGEYRLQVQ QDVRLTGHKV GLTRFLA
001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY
Arabidopsis Description
GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.