CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G50960.1	Thale cress	plastid	80.32	59.52
CDX76423	Canola	cytosol, peroxisome, plastid	33.73	45.65
CDY47108	Canola	cytosol, peroxisome, plastid	33.33	45.11
KRH57481	Soybean	cytosol	12.85	42.67
CDY52119	Canola	cytosol, nucleus, peroxisome	20.48	40.16
CDX80345	Canola	cytosol, nucleus, peroxisome	20.48	40.16
KRH57748	Soybean	cytosol, nucleus, peroxisome	49.8	38.04
KRH22245	Soybean	cytosol, nucleus, peroxisome	47.39	36.99
KRH27091	Soybean	cytosol	47.79	36.84
KRH27095	Soybean	cytosol, nucleus, peroxisome	47.39	34.91
KRH22241	Soybean	cytosol, nucleus, peroxisome	46.99	34.72
KRH04670	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	47.39	34.1
KRH04189	Soybean	cytosol, nucleus, peroxisome	46.99	33.62
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	43.37	33.13
CDX94029	Canola	cytosol	43.37	31.95
CDY29619	Canola	plastid	93.57	31.7
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	43.37	31.12
CDX79045	Canola	cytosol, nucleus, peroxisome	42.17	31.07
VIT_19s0177g00020.t01	Wine grape	plastid	27.71	30.94
CDX82811	Canola	cytosol, nucleus, peroxisome	41.77	30.77
VIT_19s0177g00030.t01	Wine grape	vacuole	44.98	30.52
CDY32695	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	23.69	28.92
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	42.57	25.36
CDY10932	Canola	cytosol, nucleus, peroxisome	28.11	21.54
CDX94181	Canola	cytosol, nucleus, peroxisome	28.11	21.54
CDX91575	Canola	cytosol, nucleus, peroxisome	26.51	20.5
CDY56648	Canola	cytosol, nucleus, peroxisome	26.51	20.5
CDY02826	Canola	cytosol	28.92	19.0
CDY71106	Canola	cytosol	9.64	14.63
CDY47111	Canola	cytosol	9.24	14.2
CDY35580	Canola	plastid	0.0	0.0

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	GO:A0A078HDU1	UniProt:A0A078HDU1	EnsemblPlants:CDY35579	ProteinID:CDY35579
ProteinID:CDY35579.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00058900001	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF177	SUPFAM:SSF51197	UniParc:UPI0004EE5D0F	:	:	:

Description

BnaC05g27020DBnaC05g27020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDU1]

Coordinates

chrLK032355:-:230490..233782

Molecular Weight (calculated)

28647.1 Da

IEP (calculated)

8.355

GRAVY (calculated)

-0.384

Length

249 amino acids

Sequence
(BLAST)

001: MFREDKKLFD RSFNEKVREK FSDTSKHCYR WGNPNATSPT QYSFSEAFHI TLAEILSFSD DGNNFRTTVA MYVQEVARVA HMICEILGNQ VKVNSKYFEN
101: IFALQNSFLR LNKYHPCVFG SQVFGLVPHT DTSFITILAQ DQIGGLELKK NGQWIGVKPC SEALTVNIGD MFQALSNGVY QSVRHRVIPP ANVERLSIAF
201: FVCPYQETEI ECSGNPKKYR RFSFREYKEQ SERDVKETGD KVGLSRFLI

Best Arabidopsis Sequence Match ( AT1G50960.1 )
(BLAST)

001: MASQPPFKTN FCSIFGSSFP NSTSESNTNT STIQTSGIKL PVIDLSHLTS GEEVKRKRCV KQMVAAAKEW GFFQIVNHGI PKDVFEMMLL EEKKLFDQPF
101: SVKVRERFSD LSKNSYRWGN PSATSPAQYS VSEAFHIILS EVSRISDDRN NLRTIVETYV QEIARVAQMI CEILGKQVNV SSEYFENIFE LENSFLRLNK
201: YHPSVFGSEV FGLVPHTDTS FLTILSQDQI GGLELENNGQ WISVKPCLEA LTVNIGDMFQ ALSNGVYQSV RHRVISPANI ERMSIAFFVC PYLETEIDCF
301: GYPKKYRRFS FREYKEQSEH DVKETGDKVG LSRFLI

Arabidopsis Description

GA2OX7Gibberellin 2-beta-dioxygenase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6I4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.