CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22241	Soybean	cytosol, nucleus, peroxisome	92.01	92.28
KRH22245	Soybean	cytosol, nucleus, peroxisome	64.2	68.03
KRH57748	Soybean	cytosol, nucleus, peroxisome	64.2	66.56
KRH27091	Soybean	cytosol	63.02	65.94
KRH04670	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.79	63.29
KRH04189	Soybean	cytosol, nucleus, peroxisome	61.24	59.48
KRH57481	Soybean	cytosol	12.72	57.33
KRH27598	Soybean	cytosol, nucleus, peroxisome	51.78	51.62
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	47.34	49.08
KRH29245	Soybean	cytosol	48.52	48.52
VIT_19s0177g00020.t01	Wine grape	plastid	31.66	47.98
CDY35579	Canola	cytosol, nucleus, peroxisome	34.91	47.39
VIT_19s0177g00030.t01	Wine grape	vacuole	50.89	46.87
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	46.75	45.53
KRG91226	Soybean	cytosol, nucleus, peroxisome	48.52	44.81
AT1G50960.1	Thale cress	plastid	42.6	42.86
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	48.52	40.49
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	46.15	37.32
KRH30278	Soybean	cytosol	32.25	30.7
KRG98268	Soybean	cytosol	31.95	30.42
KRH65048	Soybean	cytosol, nucleus, peroxisome	25.74	27.27
KRH40458	Soybean	cytosol, nucleus, peroxisome	25.44	26.96
CDY35580	Canola	plastid	4.44	23.44
CDY29619	Canola	plastid	40.53	18.64
KRH40460	Soybean	cytosol	8.58	18.24
Bra030461.1-P	Field mustard	plastid	40.53	18.22

Protein Annotations

EntrezGene:100790757	Gene3D:2.60.120.330	MapMan:50.1.13	EMBL:ACUP02007772	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_12G214000
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:K7LW87
EnsemblPlants:KRH27095	ProteinID:KRH27095	ProteinID:KRH27095.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF248	SUPFAM:SSF51197	UniParc:UPI000233CB91	:

Description

hypothetical protein

Coordinates

chr12:+:37337221..37341116

Molecular Weight (calculated)

38761.5 Da

IEP (calculated)

8.016

GRAVY (calculated)

-0.243

Length

338 amino acids

Sequence
(BLAST)

001: MDYEPPFLEF YKPLLLQGSH SVDVGISGSG IIRNDKSEWR ELPLIDLGQL SLGHVEREDC MREICEAART WGFFQVVNHG VSQELLQSLR HEQVEVFRTP
101: FARKSRESFL NLPAARSYRW GNPSATNLRQ ISWSEAFHMF LPDIARMDQH QSLRSTIEAF ASVVSPLAES LVQILVQKLN IKFSYFRENC SANTSFLRLN
201: RYPPCPIFHS RVFGLLPHTD SSFLTIVNQD QIGGLQIMKD GNWFGVKPNP QALVVNIGDL LQALSNDIYI SAKHRVVAAE KVERFSVAYF YNPSKDALIE
301: SHIMPPMYRK FTFGEYRRQI EKDVKETGDK VGLSRFLL

Best Arabidopsis Sequence Match ( AT3G47190.1 )
(BLAST)

001: MSNSESYPPE FRPLMSEKST ETGLDRSKDI DIPVIDMEHL DMEKLREACK DWGIFHLENT GIPLTFMSQV KEITESVLSL PFEEKRTLFG VNSPLSYYWG
101: THTVSPSGKA VTRAPQESSG HLFEGINIPL ASLSRLLALS CTDPKLESFR VVMEEYGKHV TRIIVTLFEA IIETLSLELS GDQKMGYLSE STGVIRVQRY
201: PQCTESPGLE AHTDSSVISI INQDDVGGLE FMKDGEWFNV KPLASSFVVG LGDMMQVISD EEYKSVLHKV GKRMRKKERY SIVNFVFPDK DCMFNSTRYK
301: PFKFSEFEAQ VKLDVETHGS KVGLSRFLSN P

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JAD4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.