CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40458	Soybean	cytosol, nucleus, peroxisome	77.43	77.43
VIT_15s0046g02550.t01	Wine grape	cytosol, nucleus, peroxisome	72.1	70.12
KRH40460	Soybean	cytosol	33.54	67.3
PGSC0003DMT400000488	Potato	cytosol	67.71	67.29
GSMUA_Achr1P03100_001	Banana	cytosol	65.2	65.41
Bra019310.1-P	Field mustard	cytosol	35.74	61.62
Solyc01g094590.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	40.13	58.99
CDX94181	Canola	cytosol, nucleus, peroxisome	59.87	58.77
CDY10932	Canola	cytosol, nucleus, peroxisome	59.56	58.46
AT4G23340.1	Thale cress	cytosol, nucleus, peroxisome	59.25	58.33
KRH57481	Soybean	cytosol	9.09	38.67
KRH57748	Soybean	cytosol, nucleus, peroxisome	28.21	27.61
KRH29245	Soybean	cytosol	28.84	27.22
KRH22245	Soybean	cytosol, nucleus, peroxisome	26.33	26.33
KRH27091	Soybean	cytosol	26.65	26.32
KRH27598	Soybean	cytosol, nucleus, peroxisome	27.59	25.96
KRH22241	Soybean	cytosol, nucleus, peroxisome	27.27	25.82
KRH27095	Soybean	cytosol, nucleus, peroxisome	27.27	25.74
KRH04670	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.59	25.43
KRH04189	Soybean	cytosol, nucleus, peroxisome	27.59	25.29
KRG91226	Soybean	cytosol, nucleus, peroxisome	28.84	25.14
KRH30278	Soybean	cytosol	25.71	23.1
KRG98268	Soybean	cytosol	25.39	22.82
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	28.53	22.47

Protein Annotations

EntrezGene:100782766	Gene3D:2.60.120.330	MapMan:50.1.13	EMBL:ACUP02001307	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_03G009600
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	UniProt:I1JK87	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
EnsemblPlants:KRH65048	ProteinID:KRH65048	ProteinID:KRH65048.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF212	SUPFAM:SSF51197	UniParc:UPI00023394AB	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:956941..958584

Molecular Weight (calculated)

36472.4 Da

IEP (calculated)

5.645

GRAVY (calculated)

-0.267

Length

319 amino acids

Sequence
(BLAST)

001: MSMSEYVVEL PILDISQPLQ PSSLTSLSKA CKDWGFFHII NHGISKDLCS QIHYLSKYLF SLPSEAKLKL GPFSSIKSYT PHFIASPFFE SLRINGPNFY
101: ASAKSSEDIL FDKQTSKFSE TLQEYCSKMV DLSERILKLV LMSLEDGFEK LFYDSEFNKC HGYLRINNYS APESFEDQVE GLGMHTDMSC ITILYQDEIG
201: GLQVRSHEGK WIDISPSEGT LVVNIGDMMQ AWSNDKLRSS EHRVVLKQSV SRFSLAFFWC FEDEKVVLAP DEVVGDGNKR LYNPFVCSEY LKFRENNQRG
301: RFEKVGYTVK DFAGIKSNL

Best Arabidopsis Sequence Match ( AT4G23340.1 )
(BLAST)

001: MSELHSSLQL PVLDLTQPIE SSILSSLSEA CKEWGFFYVT NHGISKEMFS KICSLSRDVF KAPLESKLKL GPISYTPRYI ASPYFESLVV SGPDFSDSAK
101: ASADVLFQDH HKPELRETMQ EYGAKMAELS KRLIKILLMM TLGDETGKRL YQTDFSNCHG YLRLVNYTPP HDVEKQEELV EGLGMHTDMS CITIVYQDSV
201: GGLQMRSKEG KWIDINPCND FLVVNIGDLM QAWSNGRLRS SEHRVVLRKL VNRVSLAFFL CFEDEKVILA PQEIVGEGKQ RSYKSFKCSE YLKFRQSNEE
301: GKFEKIGFTV KDFAGLKLAQ PDDP

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JNI3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.