Factsheet for Bra019310.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10932	Canola	cytosol, nucleus, peroxisome	98.38	56.0
CDX94181	Canola	cytosol, nucleus, peroxisome	97.84	55.69
Solyc01g094590.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	60.54	51.61
AT4G23340.1	Thale cress	cytosol, nucleus, peroxisome	88.65	50.62
VIT_02s0025g03440.t01	Wine grape	cytosol, nucleus, peroxisome	68.11	39.25
PGSC0003DMT400040854	Potato	cytosol, plastid	64.32	37.42
PGSC0003DMT400000488	Potato	cytosol	64.32	37.07
Solyc03g025490.2.1	Tomato	plastid	63.78	36.88
KRH65048	Soybean	cytosol, nucleus, peroxisome	61.62	35.74
KRH40458	Soybean	cytosol, nucleus, peroxisome	61.08	35.42
GSMUA_Achr1P03100_001	Banana	cytosol	57.84	33.65
Bra022544.1-P	Field mustard	cytosol, nucleus, peroxisome	55.14	31.68
Bra002628.1-P	Field mustard	cytosol, nucleus, peroxisome	21.08	30.71
Bra013512.1-P	Field mustard	cytosol	29.73	21.91
Bra038780.1-P	Field mustard	cytosol	31.35	17.16
Bra020890.1-P	Field mustard	cytosol, nucleus, peroxisome	31.35	17.16
Bra020362.1-P	Field mustard	cytosol	24.32	12.93
Bra030461.1-P	Field mustard	plastid	32.97	8.11
KRH40460	Soybean	cytosol	4.32	5.03

Protein Annotations

EnsemblPlants:Bra019310.1	EnsemblPlants:Bra019310.1-P	EnsemblPlantsGene:Bra019310	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF212	PFAM:PF03171	PFscan:PS51471
SUPFAM:SSF51197	UniParc:UPI0002540E8C	UniProt:M4DS17	MapMan:50.1.13	:	:

Description

AT4G23340 (E=1e-093) | oxidoreductase, 2OG-Fe(II) oxygenase family protein

Coordinates

chrA03:-:25043620..25044177

Molecular Weight (calculated)

21262.4 Da

IEP (calculated)

5.359

GRAVY (calculated)

-0.451

Length

185 amino acids

Sequence
(BLAST)

001: MILGEETGKR FYQNEFSNCH GYLRLVNYTP PQDVEKQEEL VEGLGMHTDM SCITIVYQDS VGGLQMRSKE GKWIDINPGD DLLVVNIGDL MQAWSNGRLR
101: SSEHRVVLRK LVNRVSLGFF LCFEDEKVIL APQEILGEGN CRRYKSFKCS EYLKFRQSNE VGKFERIGYT VKDFAGLTLP EHDDP

Best Arabidopsis Sequence Match ( AT4G23340.1 )
(BLAST)

001: MSELHSSLQL PVLDLTQPIE SSILSSLSEA CKEWGFFYVT NHGISKEMFS KICSLSRDVF KAPLESKLKL GPISYTPRYI ASPYFESLVV SGPDFSDSAK
101: ASADVLFQDH HKPELRETMQ EYGAKMAELS KRLIKILLMM TLGDETGKRL YQTDFSNCHG YLRLVNYTPP HDVEKQEELV EGLGMHTDMS CITIVYQDSV
201: GGLQMRSKEG KWIDINPCND FLVVNIGDLM QAWSNGRLRS SEHRVVLRKL VNRVSLAFFL CFEDEKVILA PQEIVGEGKQ RSYKSFKCSE YLKFRQSNEE
301: GKFEKIGFTV KDFAGLKLAQ PDDP

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JNI3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.