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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79045 Canola cytosol, nucleus, peroxisome 70.92 52.66
CDX82811 Canola cytosol, nucleus, peroxisome 70.52 52.37
Bra038780.1-P Field mustard cytosol 66.14 49.11
Bra020890.1-P Field mustard cytosol, nucleus, peroxisome 65.34 48.52
AT4G21200.1 Thale cress cytosol, nucleus, peroxisome 63.35 47.04
Bra002628.1-P Field mustard cytosol, nucleus, peroxisome 22.31 44.09
GSMUA_Achr9P11880_001 Banana cytosol, nucleus, peroxisome 43.82 33.74
GSMUA_Achr6P21950_001 Banana cytosol, nucleus, peroxisome 44.22 31.99
Bra019310.1-P Field mustard cytosol 21.91 29.73
GSMUA_Achr8P03660_001 Banana endoplasmic reticulum, golgi 45.02 27.03
Bra020362.1-P Field mustard cytosol 27.49 19.83
Bra022544.1-P Field mustard cytosol, nucleus, peroxisome 20.32 15.84
Bra030461.1-P Field mustard plastid 31.08 10.37
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13EnsemblPlantsGene:Bra013512EnsemblPlants:Bra013512.1EnsemblPlants:Bra013512.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872
GO:GO:0055114InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443UniProt:M4DAK2InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF386SUPFAM:SSF51197UniParc:UPI0002546DC2
Description
AT4G21200 (E=9e-093) ATGA2OX8, GA2OX8 | GA2OX8 (GIBBERELLIN 2-OXIDASE 8); gibberellin 2-beta-dioxygenase
Coordinates
chrA01:+:6059669..6062707
Molecular Weight (calculated)
28787.5 Da
IEP (calculated)
8.947
GRAVY (calculated)
-0.495
Length
251 amino acids
Sequence
(BLAST)
001: MERFASESEA LAHTLAEVLA EKLERKSNFF KENCVRNTCY VRMNRYPPCP KPSEVYGLMP HTDSDFLTIL YQDQVGGLQL IKDNRWVAVK PNPRALIINI
101: GDLFQAWSNG MYKSVEHRVM TNPTVERFST AYFLCPSYDA VIECSGDCPS YRNFSFREFR QQVQDDVKKL GYKVGLPSSH KEVGDTHSTT RKKEVPSLKS
201: EGEGIPALFV RGAPEQIWIK VRNDGIRETI KNMHTKSRAR IQVVLSIYDL K
Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)
001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY
Arabidopsis Description
GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.