Factsheet for AT4G21200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, peroxisome

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47108	Canola	cytosol, peroxisome, plastid	49.41	90.76
CDX76423	Canola	cytosol, peroxisome, plastid	49.41	90.76
CDX94029	Canola	cytosol	90.53	90.53
Bra038780.1-P	Field mustard	cytosol	89.64	89.64
Bra020890.1-P	Field mustard	cytosol, nucleus, peroxisome	87.57	87.57
CDX79045	Canola	cytosol, nucleus, peroxisome	86.39	86.39
CDX82811	Canola	cytosol, nucleus, peroxisome	86.09	86.09
CDY71106	Canola	cytosol	39.05	80.49
CDY47111	Canola	cytosol	37.87	79.01
Bra013512.1-P	Field mustard	cytosol	47.04	63.35
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	53.25	55.21
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	50.89	49.57
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	53.25	43.06
AT1G50960.1	Thale cress	plastid	41.12	41.37
AT4G23340.1	Thale cress	cytosol, nucleus, peroxisome	28.99	30.25
AT5G58660.1	Thale cress	cytosol, nucleus, peroxisome	31.36	30.11
AT3G47190.1	Thale cress	cytosol	27.22	27.79
AT5G51310.1	Thale cress	cytosol, nucleus, peroxisome	26.04	27.08

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	EntrezGene:827868	ProteinID:AEE84420.1	ArrayExpress:AT4G21200	EnsemblPlantsGene:AT4G21200
RefSeq:AT4G21200	TAIR:AT4G21200	RefSeq:AT4G21200-TAIR-G	EnsemblPlants:AT4G21200.1	TAIR:AT4G21200.1	Symbol:ATGA2OX8
ProteinID:CAA17539.1	ProteinID:CAB79120.1	ncoils:Coil	InterPro:DIOX_N	EMBL:DQ446856	EMBL:DQ653213
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009685	GO:GO:0009686	GO:GO:0009987	GO:GO:0016491	GO:GO:0045543
GO:GO:0046872	GO:GO:0051213	GO:GO:0052635	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	RefSeq:NP_193852.2	UniProt:O49561	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PO:PO:0000293	PO:PO:0006081	PO:PO:0007611	PO:PO:0009031	PO:PO:0009046	PO:PO:0009067
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF386	SUPFAM:SSF51197	UniParc:UPI0000D5BCEF	:

Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]

Coordinates

chr4:+:11302682..11306770

Molecular Weight (calculated)

39088.4 Da

IEP (calculated)

6.082

GRAVY (calculated)

-0.468

Length

338 amino acids

Sequence
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.