Factsheet for Bra038780.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94029	Canola	cytosol	98.22	98.22
AT4G21200.1	Thale cress	cytosol, nucleus, peroxisome	89.64	89.64
Bra020890.1-P	Field mustard	cytosol, nucleus, peroxisome	89.64	89.64
Bra013512.1-P	Field mustard	cytosol	49.11	66.14
GSMUA_Achr9P11880_001	Banana	cytosol, nucleus, peroxisome	52.37	54.29
GSMUA_Achr6P21950_001	Banana	cytosol, nucleus, peroxisome	50.59	49.28
Bra002628.1-P	Field mustard	cytosol, nucleus, peroxisome	16.57	44.09
GSMUA_Achr8P03660_001	Banana	endoplasmic reticulum, golgi	52.66	42.58
Bra019310.1-P	Field mustard	cytosol	17.16	31.35
Bra020362.1-P	Field mustard	cytosol	30.18	29.31
Bra022544.1-P	Field mustard	cytosol, nucleus, peroxisome	24.85	26.09
Bra030461.1-P	Field mustard	plastid	38.46	17.29

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	EnsemblPlantsGene:Bra038780	EnsemblPlants:Bra038780.1	EnsemblPlants:Bra038780.1-P	ncoils:Coil
InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
UniProt:M4FCG1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF386	SUPFAM:SSF51197	UniParc:UPI0002540C92	:	:	:

Description

AT4G21200 (E=7e-180) ATGA2OX8, GA2OX8 | GA2OX8 (GIBBERELLIN 2-OXIDASE 8); gibberellin 2-beta-dioxygenase

Coordinates

chrA03:+:24075920..24079253

Molecular Weight (calculated)

39348.0 Da

IEP (calculated)

7.710

GRAVY (calculated)

-0.425

Length

338 amino acids

Sequence
(BLAST)

001: MDPPFNEIYK NLLFKQITNT ENNVPQIPFS FSITAVVEEV ELPLIDVSRL IDGAEKEREI CKEEIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSER FSAGSYRWGP PSATCLRQLS WSEAFHVPMT DISDNKDFTT LRSTMEKFAS ESEALAYTLA EVLAEKSGRK SNFFKEKCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPRAL IINIGDLFQA WSNGMYKSVE HRVMTNPTVE RFSTAYFLCP SYDAFIECSV
301: YCPTYRNFSF REFRQQVQED VKKLGFKVGL PRFVNHLY

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.