Factsheet for Bra020362.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32695	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	55.46	94.61
CDY02826	Canola	cytosol	97.13	89.18
Bra002628.1-P	Field mustard	cytosol, nucleus, peroxisome	31.9	87.4
AT5G58660.1	Thale cress	cytosol, nucleus, peroxisome	81.32	80.4
VIT_06s0004g06790.t01	Wine grape	cytosol	47.41	48.96
KRH30278	Soybean	cytosol	48.56	47.61
KRG98268	Soybean	cytosol	48.28	47.32
Solyc06g082030.2.1	Tomato	cytosol	43.39	42.78
PGSC0003DMT400078051	Potato	cytosol	43.39	42.54
GSMUA_Achr10P...	Banana	mitochondrion	43.1	41.67
Os04t0407800-01	Rice	cytosol, nucleus, peroxisome	37.36	38.69
Zm00001d035994_P001	Maize	cytosol	36.78	38.1
TraesCS3B01G603000.1	Wheat	cytosol	35.06	37.31
HORVU3Hr1G117870.1	Barley	cytosol	33.91	36.65
OQU85872	Sorghum	cytosol	36.21	35.9
TraesCS3D01G542800.1	Wheat	cytosol	34.77	35.8
TraesCS3A01G537300.2	Wheat	cytosol, nucleus, peroxisome	27.01	30.82
Bra020890.1-P	Field mustard	cytosol, nucleus, peroxisome	29.89	30.77
Bra038780.1-P	Field mustard	cytosol	29.31	30.18
Bra013512.1-P	Field mustard	cytosol	19.83	27.49
Bra019310.1-P	Field mustard	cytosol	12.93	24.32
Bra022544.1-P	Field mustard	cytosol, nucleus, peroxisome	20.4	22.05
Bra030461.1-P	Field mustard	plastid	25.57	11.84

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	EnsemblPlantsGene:Bra020362	EnsemblPlants:Bra020362.1	EnsemblPlants:Bra020362.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4DV19
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF206	SUPFAM:SSF51197	UniParc:UPI0002543000	SEG:seg	:	:

Description

AT5G58660 (E=4e-148) | oxidoreductase, 2OG-Fe(II) oxygenase family protein

Coordinates

chrA02:-:6401645..6404102

Molecular Weight (calculated)

39018.5 Da

IEP (calculated)

4.804

GRAVY (calculated)

-0.249

Length

348 amino acids

Sequence
(BLAST)

001: MSITESYPPA FRRVINDGAP SATAEIEPVL VQDKDIDVPV IDFECLDKEI LTEACRDWGI FRLKNHGVPL PLMSQLQEIS ESLLSLPFEN KQKLFAAVNS
101: PMSYFWGTPA LNRSGDALKR GAQASNVSMV EGFNVPLSKL PASTSCDDDA QRSELESFRV LIEEYGRHIT RIAVSLFEAI AQTLNLELSS HQKSGYLLES
201: TGLIRVYRYP PSDKTAGEAL GMEVHTDSSV ISILKEDETG GLEIMKDEEW FRVKPVADTL IVNLGDMMQA ISDNEYKSVE HRVKKKDMTT KRHSVCYFVF
301: PQRDCVIKSS NYKPFTYSDF EAQVQADVQS LGTKIGLLRF TPESPLFL

Best Arabidopsis Sequence Match ( AT5G58660.1 )
(BLAST)

001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUZ1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.