Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020362.1-P | Field mustard | cytosol | 89.18 | 97.13 |
| CDX80345 | Canola | cytosol, nucleus, peroxisome | 32.45 | 96.85 |
| CDY32695 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole | 50.66 | 94.12 |
| CDY52119 | Canola | cytosol, nucleus, peroxisome | 29.02 | 86.61 |
| AT5G58660.1 | Thale cress | cytosol, nucleus, peroxisome | 73.88 | 79.55 |
| VIT_06s0004g06790.t01 | Wine grape | cytosol | 43.01 | 48.37 |
| KRH30278 | Soybean | cytosol | 44.85 | 47.89 |
| KRG98268 | Soybean | cytosol | 44.59 | 47.61 |
| Solyc06g082030.2.1 | Tomato | cytosol | 39.58 | 42.49 |
| PGSC0003DMT400078051 | Potato | cytosol | 39.31 | 41.97 |
| GSMUA_Achr10P... | Banana | mitochondrion | 39.31 | 41.39 |
| Zm00001d035994_P001 | Maize | cytosol | 34.56 | 38.99 |
| Os04t0407800-01 | Rice | cytosol, nucleus, peroxisome | 34.56 | 38.99 |
| CDX76423 | Canola | cytosol, peroxisome, plastid | 18.73 | 38.59 |
| CDY47108 | Canola | cytosol, peroxisome, plastid | 18.73 | 38.59 |
| TraesCS3B01G603000.1 | Wheat | cytosol | 32.72 | 37.92 |
| TraesCS3D01G542800.1 | Wheat | cytosol | 32.98 | 36.98 |
| HORVU3Hr1G117870.1 | Barley | cytosol | 31.4 | 36.96 |
| OQU85872 | Sorghum | cytosol | 33.77 | 36.47 |
| CDX79045 | Canola | cytosol, nucleus, peroxisome | 28.23 | 31.66 |
| CDX82811 | Canola | cytosol, nucleus, peroxisome | 27.97 | 31.36 |
| TraesCS3A01G537300.2 | Wheat | cytosol, nucleus, peroxisome | 25.07 | 31.15 |
| CDX94029 | Canola | cytosol | 27.7 | 31.07 |
| CDY35579 | Canola | cytosol, nucleus, peroxisome | 19.0 | 28.92 |
| CDY10932 | Canola | cytosol, nucleus, peroxisome | 20.84 | 24.31 |
| CDX94181 | Canola | cytosol, nucleus, peroxisome | 20.58 | 24.0 |
| CDY56648 | Canola | cytosol, nucleus, peroxisome | 19.0 | 22.36 |
| CDX91575 | Canola | cytosol, nucleus, peroxisome | 18.73 | 22.05 |
| CDY47111 | Canola | cytosol | 9.23 | 21.6 |
| CDY71106 | Canola | cytosol | 9.23 | 21.34 |
| CDY35580 | Canola | plastid | 2.9 | 17.19 |
| CDY29619 | Canola | plastid | 23.48 | 12.11 |
Protein Annotations
| EnsemblPlants:CDY02826 | EnsemblPlantsGene:GSBRNA2T00115016001 | GO:A0A078ENT4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPR005123 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF206 | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | ProteinID:CDY02826 |
| ProteinID:CDY02826.1 | SEG:seg | SUPFAM:SSF51197 | UniParc:UPI0004EF0700 | MapMan:50.1.13 | : |
Description
BnaC02g10630D
Coordinates
chrLK031937:+:675299..679501
Molecular Weight (calculated)
42475.4 Da
IEP (calculated)
4.546
GRAVY (calculated)
-0.237
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MSITESYPPA FRRVINDGAP SGTAEIESVL VQDKDIDIPV IDFECLDKDI LTEACREWGI FRLKNHGVPL PLMSQLQEIS ESLLSLPFEN KQKLFAAVNS
101: PMSYFWGTPA LNRSGDALKR GAQASNVSMV EGFNVPLSKL PASTSCDDDA QHSELESFSM SGAVDCTDDE KQCDIVSRAW GLIDEMFTFS VLIEEYGRHI
201: TRIAVSLFEA IAQTLNLELS SHQRSGYLLE STGLIRVYRY PPSDKTAGEA LGMEVHTDSS VISILKEDET GGLEIMKDEE WFRVKPVADT LIVNLGDMMQ
301: AISDNEYKSV EHRVKKKDMT TKRHSVCYFV FPQRDYVIKS SNYKPFTYSE FEAQVQADVQ SLGTKIGLLR FTPESPLFL
101: PMSYFWGTPA LNRSGDALKR GAQASNVSMV EGFNVPLSKL PASTSCDDDA QHSELESFSM SGAVDCTDDE KQCDIVSRAW GLIDEMFTFS VLIEEYGRHI
201: TRIAVSLFEA IAQTLNLELS SHQRSGYLLE STGLIRVYRY PPSDKTAGEA LGMEVHTDSS VISILKEDET GGLEIMKDEE WFRVKPVADT LIVNLGDMMQ
301: AISDNEYKSV EHRVKKKDMT TKRHSVCYFV FPQRDYVIKS SNYKPFTYSE FEAQVQADVQ SLGTKIGLLR FTPESPLFL
001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUZ1]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.