CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035994_P001	Maize	cytosol	78.92	82.44
Os04t0407800-01	Rice	cytosol, nucleus, peroxisome	54.42	56.85
HORVU3Hr1G117870.1	Barley	cytosol	45.58	49.69
TraesCS3B01G603000.1	Wheat	cytosol	46.15	49.54
Bra002628.1-P	Field mustard	cytosol, nucleus, peroxisome	17.66	48.82
CDX80345	Canola	cytosol, nucleus, peroxisome	17.09	47.24
CDY52119	Canola	cytosol, nucleus, peroxisome	17.09	47.24
TraesCS3D01G542800.1	Wheat	cytosol	44.73	46.45
CDY32695	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	26.21	45.1
GSMUA_Achr10P...	Banana	mitochondrion	43.02	41.94
TraesCS3A01G537300.2	Wheat	cytosol, nucleus, peroxisome	35.33	40.66
VIT_06s0004g06790.t01	Wine grape	cytosol	39.03	40.65
KRG98268	Soybean	cytosol	38.75	38.31
KRH30278	Soybean	cytosol	37.89	37.46
Bra020362.1-P	Field mustard	cytosol	35.9	36.21
AT5G58660.1	Thale cress	cytosol, nucleus, peroxisome	35.9	35.8
Solyc06g082030.2.1	Tomato	cytosol	34.76	34.56
PGSC0003DMT400078051	Potato	cytosol	34.19	33.8
CDY02826	Canola	cytosol	36.47	33.77
AT3G47190.1	Thale cress	cytosol	29.63	31.42
KXG26736	Sorghum	cytosol, peroxisome, plastid	30.48	28.92
KXG30679	Sorghum	cytosol	29.63	27.23
EER95722	Sorghum	cytosol	27.07	26.54

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	UniProt:A0A1Z5RQ35	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:OQU85872	ProteinID:OQU85872	ProteinID:OQU85872.1	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF206	EnsemblPlantsGene:SORBI_3004G329100	SUPFAM:SSF51197
UniParc:UPI000B8B9D2F	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:66323839..66326998

Molecular Weight (calculated)

36802.4 Da

IEP (calculated)

5.321

GRAVY (calculated)

-0.021

Length

351 amino acids

Sequence
(BLAST)

001: MALGSESQAA TTADPSCPPF PLLEDDGGHI HEQEQEVPSG AELELPTVDL DAPGEALAAA CRGLGVFRLA NHGVPASLSA RLFATARAAL AGAPFHDKRA
101: QPGYFWGTPA LSLRVRDVNW VEGFHVALGG HQQPAPGPPL GDLLDLAAEY GAHMARVARA LFDALAAPLG LGADQAATYL AERDGFLRVY RYPRCPEPGH
201: LGMEAHTDSS VLSVINQDAV GGLQVFHDGA WRDVAPGAGE TGTLLVNLGD MARAISGDAY CSVRHRVAAS QAAERLSLCY FAFPQDDAVI SCAGGRYRPF
301: TYAEFREQVQ ADIKATGSKK PVGAPLAGPH GTVTVSIAGA NAFNMVLSWT V

Best Arabidopsis Sequence Match ( AT5G58660.1 )
(BLAST)

001: MSISESYPPA FRRVTNDENP PATPVIVQGK DINIPVIDLE RLDKEILREA CKEWGIFRLE NHGVPLALTS RLQEISESLL SLPFEKKREL FAAVKSPLSY
101: FWGTPALNRS GDALKRGAQA SNLTMLEGFN VPLSSLSSLS KLPTSTCCDD DAQEEPKLES FRVLMEEYGK HITRIAVSLF EAIAQTLNLE LSGNRRSEYL
201: SESTGLIRVY RYPQSSEEAA REALGMEVHT DSSVISILRE DESGGLEIMK GEEWFCVKPV ANTLIVNLGD MMQAISDDEY KSVTHRVKKR NRKTERHSVC
301: YFVFPKRDCV IKSSNYKLFT YSDFEAQVQA DVQSLGTKIG LPRFNPNSPL FL

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LUZ1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.