CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018617_P001	Maize	cytosol	84.64	85.59
Os07t0103500-01	Rice	cytosol	59.78	62.76
PGSC0003DMT400068810	Potato	cytosol	46.37	49.85
KRH29245	Soybean	cytosol	46.09	48.82
KXG26736	Sorghum	cytosol, peroxisome, plastid	49.72	48.11
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	45.81	47.67
VIT_01s0010g01650.t01	Wine grape	cytosol, nucleus, peroxisome	48.04	47.38
KXG30679	Sorghum	cytosol	50.56	47.38
Solyc04g008670.1.1	Tomato	golgi	46.09	46.22
KRH24233	Soybean	endoplasmic reticulum, golgi, vacuole	46.09	40.74
OQU85872	Sorghum	cytosol	26.54	27.07

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	EntrezGene:8054497	UniProt:C5X743	InterPro:DIOX_N	EnsemblPlants:EER95722
ProteinID:EER95722	ProteinID:EER95722.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF250	EnsemblPlantsGene:SORBI_3002G003100	SUPFAM:SSF51197	UniParc:UPI0001A83403	RefSeq:XP_002459201.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:414138..418558

Molecular Weight (calculated)

39638.6 Da

IEP (calculated)

5.402

GRAVY (calculated)

-0.321

Length

358 amino acids

Sequence
(BLAST)

001: MEDYDYEPPL MATYRHLLDS HPHRLDVVDH RSGADDDEEG FLLPVIDLSS LLEQSSSGAE AAAEQCRASI VRAASEWGFF QVTNHGVPQA LLDELHQAQV
101: AVFRRPFHLK ASQPLLDFSP ESYRWGTPTA TCLDQLSWSE AYHIPTTNTT AAADDKTRLV VEEVSTAMSK LAQRLAGILV ADLLLGDSSI GDGEDDDTAA
201: AVVSRCTRST CFLRLNRYPP CPAPSGAYGL CPHTDSDFLT ILHQDGVGGL QLVKAGRWVA VKPNPGALIV NVGDLLQAWS NDRYRSVEHR VMASDARERF
301: SVAFFLCPSY DTLVRPRCGA GGPPRYESFT FGEYRNQIRE DVRLTGRKLG LQRFRKPE

Best Arabidopsis Sequence Match ( AT4G21200.1 )
(BLAST)

001: MDPPFNEIYN NLLYNQITKK DNDVSEIPFS FSVTAVVEEV ELPVIDVSRL IDGAEEEREK CKEAIARASR EWGFFQVINH GISMDVLEKM RQEQIRVFRE
101: PFDKKSKSEK FSAGSYRWGT PSATSIRQLS WSEAFHVPMT DISDNKDFTT LSSTMEKFAS ESEALAYMLA EVLAEKSGQN SSFFKENCVR NTCYLRMNRY
201: PPCPKPSEVY GLMPHTDSDF LTILYQDQVG GLQLIKDNRW IAVKPNPKAL IINIGDLFQA WSNGMYKSVE HRVMTNPKVE RFSTAYFMCP SYDAVIECSS
301: DRPAYRNFSF REFRQQVQED VKKFGFKVGL PRFLNHVY

Arabidopsis Description

GA2OX8Gibberellin 2-beta-dioxygenase 8 [Source:UniProtKB/Swiss-Prot;Acc:O49561]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.